Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
NRXN3Q9Y4C0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC32.69■■■□□ 2.82
NRXN3Q9Y4C0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC32.68■■■□□ 2.82
NRXN3Q9Y4C0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NRXN3Q9Y4C0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
NRXN3Q9Y4C0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC32.68■■■□□ 2.82
NRXN3Q9Y4C0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC32.67■■■□□ 2.82
NRXN3Q9Y4C0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC32.67■■■□□ 2.82
NRXN3Q9Y4C0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
NRXN3Q9Y4C0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC32.66■■■□□ 2.82
NRXN3Q9Y4C0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC32.66■■■□□ 2.82
NRXN3Q9Y4C0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC32.66■■■□□ 2.82
NRXN3Q9Y4C0 AC092803.2-201ENST00000564287 1899 ntBASIC32.66■■■□□ 2.82
NRXN3Q9Y4C0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
NRXN3Q9Y4C0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC32.66■■■□□ 2.82
NRXN3Q9Y4C0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC32.66■■■□□ 2.82
NRXN3Q9Y4C0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
NRXN3Q9Y4C0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
NRXN3Q9Y4C0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
NRXN3Q9Y4C0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
NRXN3Q9Y4C0 HES6-206ENST00000409574 738 ntTSL 2 BASIC32.65■■■□□ 2.82
NRXN3Q9Y4C0 IKBKGP1-201ENST00000612193 1073 ntBASIC32.65■■■□□ 2.82
NRXN3Q9Y4C0 SP2-202ENST00000613139 908 ntTSL 5 BASIC32.65■■■□□ 2.82
NRXN3Q9Y4C0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
NRXN3Q9Y4C0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
NRXN3Q9Y4C0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
NRXN3Q9Y4C0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
NRXN3Q9Y4C0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC32.63■■■□□ 2.81
NRXN3Q9Y4C0 KRT18P5-201ENST00000436075 1291 ntBASIC32.62■■■□□ 2.81
NRXN3Q9Y4C0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC32.62■■■□□ 2.81
NRXN3Q9Y4C0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC32.62■■■□□ 2.81
NRXN3Q9Y4C0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
NRXN3Q9Y4C0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
NRXN3Q9Y4C0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC32.62■■■□□ 2.81
NRXN3Q9Y4C0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
NRXN3Q9Y4C0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
NRXN3Q9Y4C0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
NRXN3Q9Y4C0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
NRXN3Q9Y4C0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
NRXN3Q9Y4C0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
NRXN3Q9Y4C0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 AC090192.1-201ENST00000517740 490 ntBASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 AC241377.3-202ENST00000626088 1088 ntBASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 AC241585.3-202ENST00000628937 1088 ntBASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 AC245100.8-202ENST00000629247 1058 ntBASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC32.6■■■□□ 2.81
NRXN3Q9Y4C0 BX842568.3-201ENST00000418104 571 ntBASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 AC092437.1-201ENST00000624794 1048 ntBASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 SLC6A10P-202ENST00000431994 2058 ntBASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 MPST-208ENST00000628507 698 ntTSL 5 BASIC32.59■■■□□ 2.81
NRXN3Q9Y4C0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
NRXN3Q9Y4C0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC32.58■■■□□ 2.81
NRXN3Q9Y4C0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
NRXN3Q9Y4C0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
NRXN3Q9Y4C0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC32.58■■■□□ 2.81
NRXN3Q9Y4C0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC32.58■■■□□ 2.81
NRXN3Q9Y4C0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC32.57■■■□□ 2.81
NRXN3Q9Y4C0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC32.57■■■□□ 2.8
NRXN3Q9Y4C0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC32.57■■■□□ 2.8
NRXN3Q9Y4C0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
NRXN3Q9Y4C0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
NRXN3Q9Y4C0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC32.56■■■□□ 2.8
NRXN3Q9Y4C0 AC233992.3-201ENST00000607491 485 ntBASIC32.56■■■□□ 2.8
NRXN3Q9Y4C0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC32.56■■■□□ 2.8
NRXN3Q9Y4C0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
NRXN3Q9Y4C0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
NRXN3Q9Y4C0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 AC009086.3-201ENST00000623486 1008 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 AC034268.1-201ENST00000441047 882 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 DUX4L2-201ENST00000561772 1275 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 DUX4L6-201ENST00000626483 1275 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 DUX4L1-201ENST00000627662 1275 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 DUX4L8-201ENST00000629013 1275 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 DUX4L3-201ENST00000630187 1275 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 DUX4L7-201ENST00000630678 1275 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 DUX4L5-201ENST00000630834 1275 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 RARRES2P11-201ENST00000635158 484 ntBASIC32.55■■■□□ 2.8
NRXN3Q9Y4C0 SLC47A1P1-202ENST00000449666 945 ntBASIC32.54■■■□□ 2.8
NRXN3Q9Y4C0 MIR3181-201ENST00000578512 73 ntBASIC32.54■■■□□ 2.8
NRXN3Q9Y4C0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
NRXN3Q9Y4C0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms