Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
POLR1DQ9Y2S0 AC010980.1-201ENST00000587192 1142 ntBASIC20.33■□□□□ 0.85
POLR1DQ9Y2S0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.33■□□□□ 0.85
POLR1DQ9Y2S0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.33■□□□□ 0.85
POLR1DQ9Y2S0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
POLR1DQ9Y2S0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
POLR1DQ9Y2S0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.33■□□□□ 0.84
POLR1DQ9Y2S0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.33■□□□□ 0.84
POLR1DQ9Y2S0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
POLR1DQ9Y2S0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
POLR1DQ9Y2S0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
POLR1DQ9Y2S0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1DQ9Y2S0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
POLR1DQ9Y2S0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.32■□□□□ 0.84
POLR1DQ9Y2S0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.32■□□□□ 0.84
POLR1DQ9Y2S0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.32■□□□□ 0.84
POLR1DQ9Y2S0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
POLR1DQ9Y2S0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
POLR1DQ9Y2S0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
POLR1DQ9Y2S0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1DQ9Y2S0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1DQ9Y2S0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1DQ9Y2S0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
POLR1DQ9Y2S0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
POLR1DQ9Y2S0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
POLR1DQ9Y2S0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.3■□□□□ 0.84
POLR1DQ9Y2S0 AL033527.3-201ENST00000566366 1196 ntBASIC20.3■□□□□ 0.84
POLR1DQ9Y2S0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 THA1P-201ENST00000590384 1145 ntBASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
POLR1DQ9Y2S0 AL022069.1-201ENST00000568025 1636 ntBASIC20.28■□□□□ 0.84
POLR1DQ9Y2S0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.28■□□□□ 0.84
POLR1DQ9Y2S0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1DQ9Y2S0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1DQ9Y2S0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.28■□□□□ 0.84
POLR1DQ9Y2S0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1DQ9Y2S0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1DQ9Y2S0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.28■□□□□ 0.84
POLR1DQ9Y2S0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
POLR1DQ9Y2S0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 AL161729.1-201ENST00000604104 1402 ntBASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 AC120024.1-201ENST00000562672 995 ntBASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.27■□□□□ 0.84
POLR1DQ9Y2S0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1DQ9Y2S0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.26■□□□□ 0.83
POLR1DQ9Y2S0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.26■□□□□ 0.83
POLR1DQ9Y2S0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.26■□□□□ 0.83
POLR1DQ9Y2S0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
POLR1DQ9Y2S0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
POLR1DQ9Y2S0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
POLR1DQ9Y2S0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
POLR1DQ9Y2S0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 PVT1_1.1-201ENST00000615125 194 ntBASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
POLR1DQ9Y2S0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1DQ9Y2S0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
POLR1DQ9Y2S0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.24■□□□□ 0.83
POLR1DQ9Y2S0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms