Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 AC135983.2-203ENST00000454486 1613 ntBASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN2Q9UHD9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 AC073130.3-201ENST00000624389 2278 ntBASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.18■□□□□ 0.66
UBQLN2Q9UHD9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBQLN2Q9UHD9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 SLC6A10P-202ENST00000431994 2058 ntBASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.16■□□□□ 0.66
UBQLN2Q9UHD9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBQLN2Q9UHD9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBQLN2Q9UHD9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
UBQLN2Q9UHD9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN2Q9UHD9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
UBQLN2Q9UHD9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN2Q9UHD9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN2Q9UHD9 HLA-V-202ENST00000446817 847 ntBASIC19.13■□□□□ 0.65
UBQLN2Q9UHD9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.13■□□□□ 0.65
UBQLN2Q9UHD9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN2Q9UHD9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
UBQLN2Q9UHD9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN2Q9UHD9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN2Q9UHD9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN2Q9UHD9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN2Q9UHD9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN2Q9UHD9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN2Q9UHD9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.12■□□□□ 0.65
UBQLN2Q9UHD9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN2Q9UHD9 DUX4L13-201ENST00000554103 1267 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms