Protein–RNA interactions for Protein: Q9UGI6

KCNN3, Small conductance calcium-activated potassium channel protein 3, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN3Q9UGI6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNN3Q9UGI6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNN3Q9UGI6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KCNN3Q9UGI6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
KCNN3Q9UGI6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
KCNN3Q9UGI6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 AC133561.4-201ENST00000566112 224 ntBASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 AC005837.3-201ENST00000612163 286 ntBASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCNN3Q9UGI6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNN3Q9UGI6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.66■□□□□ 0.9
KCNN3Q9UGI6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
KCNN3Q9UGI6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNN3Q9UGI6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNN3Q9UGI6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KCNN3Q9UGI6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCNN3Q9UGI6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
KCNN3Q9UGI6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 AC096631.2-201ENST00000436136 790 ntBASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KCNN3Q9UGI6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCNN3Q9UGI6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.64■□□□□ 0.9
KCNN3Q9UGI6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.64■□□□□ 0.9
KCNN3Q9UGI6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCNN3Q9UGI6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNN3Q9UGI6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNN3Q9UGI6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNN3Q9UGI6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNN3Q9UGI6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
KCNN3Q9UGI6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNN3Q9UGI6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNN3Q9UGI6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNN3Q9UGI6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNN3Q9UGI6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNN3Q9UGI6 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNN3Q9UGI6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
KCNN3Q9UGI6 AC068473.5-201ENST00000616428 2072 ntBASIC20.63■□□□□ 0.89
KCNN3Q9UGI6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNN3Q9UGI6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNN3Q9UGI6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KCNN3Q9UGI6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNN3Q9UGI6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
KCNN3Q9UGI6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNN3Q9UGI6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNN3Q9UGI6 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNN3Q9UGI6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNN3Q9UGI6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNN3Q9UGI6 MIR4466-201ENST00000606121 54 ntBASIC20.61■□□□□ 0.89
KCNN3Q9UGI6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
KCNN3Q9UGI6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNN3Q9UGI6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNN3Q9UGI6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNN3Q9UGI6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNN3Q9UGI6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.59■□□□□ 0.89
KCNN3Q9UGI6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.59■□□□□ 0.89
KCNN3Q9UGI6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNN3Q9UGI6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms