Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.25■□□□□ 0.67
CLN8Q9UBY8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 LINC00543-201ENST00000567234 1845 ntBASIC19.24■□□□□ 0.67
CLN8Q9UBY8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 AC010997.5-201ENST00000609182 354 ntBASIC19.24■□□□□ 0.67
CLN8Q9UBY8 AC131212.1-201ENST00000613771 668 ntBASIC19.24■□□□□ 0.67
CLN8Q9UBY8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLN8Q9UBY8 AC141586.4-201ENST00000624558 1573 ntBASIC19.23■□□□□ 0.67
CLN8Q9UBY8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLN8Q9UBY8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CLN8Q9UBY8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.23■□□□□ 0.67
CLN8Q9UBY8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.23■□□□□ 0.67
CLN8Q9UBY8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLN8Q9UBY8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.23■□□□□ 0.67
CLN8Q9UBY8 HLA-L-211ENST00000482052 1765 ntBASIC19.23■□□□□ 0.67
CLN8Q9UBY8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLN8Q9UBY8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLN8Q9UBY8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CLN8Q9UBY8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLN8Q9UBY8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLN8Q9UBY8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.19■□□□□ 0.66
CLN8Q9UBY8 SNX5-217ENST00000606557 1087 ntBASIC19.19■□□□□ 0.66
CLN8Q9UBY8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.19■□□□□ 0.66
CLN8Q9UBY8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.19■□□□□ 0.66
CLN8Q9UBY8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLN8Q9UBY8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLN8Q9UBY8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
CLN8Q9UBY8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.18■□□□□ 0.66
CLN8Q9UBY8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLN8Q9UBY8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLN8Q9UBY8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms