Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF7Q9UBF6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.31■□□□□ 0.68
RNF7Q9UBF6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF7Q9UBF6 MIR6722-201ENST00000617286 78 ntBASIC19.31■□□□□ 0.68
RNF7Q9UBF6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF7Q9UBF6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF7Q9UBF6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.3■□□□□ 0.68
RNF7Q9UBF6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF7Q9UBF6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF7Q9UBF6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF7Q9UBF6 UNC93B8-201ENST00000511903 705 ntBASIC19.3■□□□□ 0.68
RNF7Q9UBF6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF7Q9UBF6 AC010997.5-201ENST00000609182 354 ntBASIC19.3■□□□□ 0.68
RNF7Q9UBF6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF7Q9UBF6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF7Q9UBF6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF7Q9UBF6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF7Q9UBF6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RNF7Q9UBF6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF7Q9UBF6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF7Q9UBF6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF7Q9UBF6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF7Q9UBF6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF7Q9UBF6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF7Q9UBF6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF7Q9UBF6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF7Q9UBF6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 KRT16P3-201ENST00000439127 1283 ntBASIC19.27■□□□□ 0.68
RNF7Q9UBF6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF7Q9UBF6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.27■□□□□ 0.67
RNF7Q9UBF6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RNF7Q9UBF6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF7Q9UBF6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF7Q9UBF6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF7Q9UBF6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF7Q9UBF6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF7Q9UBF6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF7Q9UBF6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF7Q9UBF6 ALDH1A3-203ENST00000557963 1670 ntBASIC19.26■□□□□ 0.67
RNF7Q9UBF6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF7Q9UBF6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF7Q9UBF6 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF7Q9UBF6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RNF7Q9UBF6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF7Q9UBF6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF7Q9UBF6 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.24■□□□□ 0.67
RNF7Q9UBF6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF7Q9UBF6 AC004812.2-201ENST00000611079 2094 ntBASIC19.24■□□□□ 0.67
RNF7Q9UBF6 AC005703.6-201ENST00000623265 1329 ntBASIC19.24■□□□□ 0.67
RNF7Q9UBF6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF7Q9UBF6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF7Q9UBF6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF7Q9UBF6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF7Q9UBF6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF7Q9UBF6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF7Q9UBF6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF7Q9UBF6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF7Q9UBF6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
RNF7Q9UBF6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF7Q9UBF6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms