Protein–RNA interactions for Protein: Q9NZE8

MRPL35, 39S ribosomal protein L35, mitochondrial, humanhuman

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35Q9NZE8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
MRPL35Q9NZE8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL35Q9NZE8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MRPL35Q9NZE8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRPL35Q9NZE8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRPL35Q9NZE8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRPL35Q9NZE8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MRPL35Q9NZE8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
MRPL35Q9NZE8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL35Q9NZE8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL35Q9NZE8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MRPL35Q9NZE8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MRPL35Q9NZE8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.2■□□□□ 0.18
MRPL35Q9NZE8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MRPL35Q9NZE8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL35Q9NZE8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL35Q9NZE8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
MRPL35Q9NZE8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.19■□□□□ 0.18
MRPL35Q9NZE8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL35Q9NZE8 RPS2P35-201ENST00000443417 897 ntBASIC16.19■□□□□ 0.18
MRPL35Q9NZE8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MRPL35Q9NZE8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 ANOS2P-203ENST00000472227 1816 ntBASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MRPL35Q9NZE8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 AC008813.1-201ENST00000536597 885 ntBASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.17■□□□□ 0.18
MRPL35Q9NZE8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUSP8P3-201ENST00000399571 1760 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUX4L13-201ENST00000554103 1267 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUX4L15-201ENST00000611059 1267 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUX4L23-201ENST00000615195 1269 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUX4L24-201ENST00000617576 1269 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUX4L22-201ENST00000618238 1269 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUX4L20-201ENST00000619712 1269 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUX4L21-201ENST00000622058 1269 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUX4L10-201ENST00000622460 1267 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 DUX4L25-201ENST00000624915 1269 ntBASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL35Q9NZE8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL35Q9NZE8 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.14■□□□□ 0.18
MRPL35Q9NZE8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL35Q9NZE8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms