Protein–RNA interactions for Protein: Q9NZ09

UBAP1, Ubiquitin-associated protein 1, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1Q9NZ09 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 DUSP8P3-201ENST00000399571 1760 ntBASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBAP1Q9NZ09 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBAP1Q9NZ09 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
UBAP1Q9NZ09 AL359504.2-201ENST00000605506 1601 ntBASIC21.44■■□□□ 1.02
UBAP1Q9NZ09 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.44■■□□□ 1.02
UBAP1Q9NZ09 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBAP1Q9NZ09 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
UBAP1Q9NZ09 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBAP1Q9NZ09 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBAP1Q9NZ09 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBAP1Q9NZ09 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.43■■□□□ 1.02
UBAP1Q9NZ09 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBAP1Q9NZ09 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBAP1Q9NZ09 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.42■■□□□ 1.02
UBAP1Q9NZ09 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBAP1Q9NZ09 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.42■■□□□ 1.02
UBAP1Q9NZ09 ANOS2P-203ENST00000472227 1816 ntBASIC21.42■■□□□ 1.02
UBAP1Q9NZ09 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBAP1Q9NZ09 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.42■■□□□ 1.02
UBAP1Q9NZ09 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
UBAP1Q9NZ09 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBAP1Q9NZ09 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBAP1Q9NZ09 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
UBAP1Q9NZ09 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBAP1Q9NZ09 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UBAP1Q9NZ09 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
UBAP1Q9NZ09 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
UBAP1Q9NZ09 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBAP1Q9NZ09 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBAP1Q9NZ09 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBAP1Q9NZ09 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.37■■□□□ 1.01
UBAP1Q9NZ09 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.36■■□□□ 1.01
UBAP1Q9NZ09 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms