Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.12■■□□□ 1.13
SPHK1Q9NYA1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.12■■□□□ 1.13
SPHK1Q9NYA1 AL117332.1-201ENST00000622628 974 ntBASIC22.12■■□□□ 1.13
SPHK1Q9NYA1 AL161729.1-201ENST00000604104 1402 ntBASIC22.12■■□□□ 1.13
SPHK1Q9NYA1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.12■■□□□ 1.13
SPHK1Q9NYA1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SPHK1Q9NYA1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.12■■□□□ 1.13
SPHK1Q9NYA1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SPHK1Q9NYA1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SPHK1Q9NYA1 LINC00543-201ENST00000567234 1845 ntBASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SPHK1Q9NYA1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
SPHK1Q9NYA1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.08■■□□□ 1.13
SPHK1Q9NYA1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
SPHK1Q9NYA1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.08■■□□□ 1.13
SPHK1Q9NYA1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.08■■□□□ 1.13
SPHK1Q9NYA1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.08■■□□□ 1.12
SPHK1Q9NYA1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SPHK1Q9NYA1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 MIR3621-201ENST00000580529 85 ntBASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SPHK1Q9NYA1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 AC005703.6-201ENST00000623265 1329 ntBASIC22.06■■□□□ 1.12
SPHK1Q9NYA1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 AL356740.2-201ENST00000601559 647 ntBASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPHK1Q9NYA1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 AC141586.4-201ENST00000624558 1573 ntBASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 AC004812.2-201ENST00000611079 2094 ntBASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 ALDH1A3-203ENST00000557963 1670 ntBASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPHK1Q9NYA1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPHK1Q9NYA1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.03■■□□□ 1.12
SPHK1Q9NYA1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHK1Q9NYA1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPHK1Q9NYA1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHK1Q9NYA1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHK1Q9NYA1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHK1Q9NYA1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms