Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.39■□□□□ 0.53
GAR1Q9NY12 U85056.1-201ENST00000616429 682 ntBASIC18.39■□□□□ 0.53
GAR1Q9NY12 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GAR1Q9NY12 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAR1Q9NY12 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAR1Q9NY12 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GAR1Q9NY12 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GAR1Q9NY12 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.39■□□□□ 0.53
GAR1Q9NY12 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GAR1Q9NY12 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GAR1Q9NY12 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GAR1Q9NY12 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAR1Q9NY12 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GAR1Q9NY12 AC009831.1-201ENST00000580420 1582 ntBASIC18.38■□□□□ 0.53
GAR1Q9NY12 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
GAR1Q9NY12 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAR1Q9NY12 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GAR1Q9NY12 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAR1Q9NY12 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAR1Q9NY12 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GAR1Q9NY12 AC018755.3-202ENST00000596210 929 ntBASIC18.38■□□□□ 0.53
GAR1Q9NY12 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.38■□□□□ 0.53
GAR1Q9NY12 AC019069.1-201ENST00000610008 1333 ntBASIC18.38■□□□□ 0.53
GAR1Q9NY12 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
GAR1Q9NY12 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAR1Q9NY12 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAR1Q9NY12 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
GAR1Q9NY12 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GAR1Q9NY12 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.37■□□□□ 0.53
GAR1Q9NY12 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAR1Q9NY12 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAR1Q9NY12 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAR1Q9NY12 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.37■□□□□ 0.53
GAR1Q9NY12 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.37■□□□□ 0.53
GAR1Q9NY12 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAR1Q9NY12 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAR1Q9NY12 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.37■□□□□ 0.53
GAR1Q9NY12 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAR1Q9NY12 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GAR1Q9NY12 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GAR1Q9NY12 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.37■□□□□ 0.53
GAR1Q9NY12 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
GAR1Q9NY12 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GAR1Q9NY12 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GAR1Q9NY12 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
GAR1Q9NY12 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAR1Q9NY12 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAR1Q9NY12 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAR1Q9NY12 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAR1Q9NY12 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAR1Q9NY12 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.36■□□□□ 0.53
GAR1Q9NY12 AL592295.1-201ENST00000400984 884 ntBASIC18.36■□□□□ 0.53
GAR1Q9NY12 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.36■□□□□ 0.53
GAR1Q9NY12 SLC6A10P-202ENST00000431994 2058 ntBASIC18.36■□□□□ 0.53
GAR1Q9NY12 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GAR1Q9NY12 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.36■□□□□ 0.53
GAR1Q9NY12 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
GAR1Q9NY12 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GAR1Q9NY12 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
GAR1Q9NY12 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.35■□□□□ 0.53
GAR1Q9NY12 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.35■□□□□ 0.53
GAR1Q9NY12 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.35■□□□□ 0.53
GAR1Q9NY12 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
GAR1Q9NY12 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GAR1Q9NY12 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.35■□□□□ 0.53
GAR1Q9NY12 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
GAR1Q9NY12 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GAR1Q9NY12 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GAR1Q9NY12 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.34■□□□□ 0.53
GAR1Q9NY12 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GAR1Q9NY12 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.34■□□□□ 0.53
GAR1Q9NY12 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GAR1Q9NY12 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
GAR1Q9NY12 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GAR1Q9NY12 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.34■□□□□ 0.53
GAR1Q9NY12 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GAR1Q9NY12 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GAR1Q9NY12 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
GAR1Q9NY12 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GAR1Q9NY12 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GAR1Q9NY12 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.33■□□□□ 0.52
GAR1Q9NY12 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GAR1Q9NY12 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GAR1Q9NY12 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GAR1Q9NY12 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GAR1Q9NY12 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.33■□□□□ 0.52
GAR1Q9NY12 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GAR1Q9NY12 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GAR1Q9NY12 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms