Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LIN7CQ9NUP9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.93■□□□□ 0.62
LIN7CQ9NUP9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
LIN7CQ9NUP9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LIN7CQ9NUP9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN7CQ9NUP9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN7CQ9NUP9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN7CQ9NUP9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN7CQ9NUP9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LIN7CQ9NUP9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN7CQ9NUP9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN7CQ9NUP9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LIN7CQ9NUP9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LIN7CQ9NUP9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 AC019171.1-201ENST00000601251 1056 ntBASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LIN7CQ9NUP9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 AC079834.2-201ENST00000609776 1949 ntBASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LIN7CQ9NUP9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 LONRF2P2-201ENST00000439212 571 ntBASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LIN7CQ9NUP9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LIN7CQ9NUP9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LIN7CQ9NUP9 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 AC010980.1-201ENST00000587192 1142 ntBASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LIN7CQ9NUP9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms