Protein–RNA interactions for Protein: Q9NUM4

TMEM106B, Transmembrane protein 106B, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106BQ9NUM4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM106BQ9NUM4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM106BQ9NUM4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEM106BQ9NUM4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM106BQ9NUM4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.33■□□□□ 0.69
TMEM106BQ9NUM4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM106BQ9NUM4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM106BQ9NUM4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.33■□□□□ 0.68
TMEM106BQ9NUM4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM106BQ9NUM4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM106BQ9NUM4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM106BQ9NUM4 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM106BQ9NUM4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TMEM106BQ9NUM4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM106BQ9NUM4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM106BQ9NUM4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 AL356740.2-201ENST00000601559 647 ntBASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 AL117332.1-201ENST00000622628 974 ntBASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM106BQ9NUM4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM106BQ9NUM4 AC093323.1-202ENST00000635031 2045 ntBASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TMEM106BQ9NUM4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM106BQ9NUM4 AC005703.6-201ENST00000623265 1329 ntBASIC19.29■□□□□ 0.68
TMEM106BQ9NUM4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TMEM106BQ9NUM4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM106BQ9NUM4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.29■□□□□ 0.68
TMEM106BQ9NUM4 MIR3621-201ENST00000580529 85 ntBASIC19.29■□□□□ 0.68
TMEM106BQ9NUM4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM106BQ9NUM4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TMEM106BQ9NUM4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM106BQ9NUM4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
TMEM106BQ9NUM4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM106BQ9NUM4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM106BQ9NUM4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms