Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.19■□□□□ 0.98
CTPS2Q9NRF8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.19■□□□□ 0.98
CTPS2Q9NRF8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.19■□□□□ 0.98
CTPS2Q9NRF8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.19■□□□□ 0.98
CTPS2Q9NRF8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CTPS2Q9NRF8 DUSP8P5-201ENST00000422884 1815 ntBASIC21.19■□□□□ 0.98
CTPS2Q9NRF8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CTPS2Q9NRF8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CTPS2Q9NRF8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CTPS2Q9NRF8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 AC022616.5-201ENST00000518796 181 ntBASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CTPS2Q9NRF8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTPS2Q9NRF8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.17■□□□□ 0.98
CTPS2Q9NRF8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.17■□□□□ 0.98
CTPS2Q9NRF8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTPS2Q9NRF8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTPS2Q9NRF8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CTPS2Q9NRF8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CTPS2Q9NRF8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 AC068473.5-201ENST00000616428 2072 ntBASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CTPS2Q9NRF8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTPS2Q9NRF8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CTPS2Q9NRF8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTPS2Q9NRF8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTPS2Q9NRF8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.15■□□□□ 0.98
CTPS2Q9NRF8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.15■□□□□ 0.98
CTPS2Q9NRF8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CTPS2Q9NRF8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.98
CTPS2Q9NRF8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CTPS2Q9NRF8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTPS2Q9NRF8 KRT8P33-201ENST00000508125 1423 ntBASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.13■□□□□ 0.97
CTPS2Q9NRF8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 MIR4508-201ENST00000584178 70 ntBASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTPS2Q9NRF8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 AC103834.1-201ENST00000520383 144 ntBASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 AC011551.1-201ENST00000614101 683 ntBASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTPS2Q9NRF8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.1■□□□□ 0.97
CTPS2Q9NRF8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTPS2Q9NRF8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms