Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.47■□□□□ 0.71
GCM1Q9NP62 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.47■□□□□ 0.71
GCM1Q9NP62 UNC93B8-201ENST00000511903 705 ntBASIC19.47■□□□□ 0.71
GCM1Q9NP62 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.47■□□□□ 0.71
GCM1Q9NP62 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GCM1Q9NP62 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GCM1Q9NP62 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GCM1Q9NP62 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GCM1Q9NP62 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GCM1Q9NP62 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GCM1Q9NP62 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.46■□□□□ 0.71
GCM1Q9NP62 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
GCM1Q9NP62 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GCM1Q9NP62 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.46■□□□□ 0.71
GCM1Q9NP62 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GCM1Q9NP62 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GCM1Q9NP62 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GCM1Q9NP62 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GCM1Q9NP62 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.46■□□□□ 0.71
GCM1Q9NP62 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GCM1Q9NP62 AL139125.2-201ENST00000623134 1869 ntBASIC19.45■□□□□ 0.7
GCM1Q9NP62 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GCM1Q9NP62 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GCM1Q9NP62 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GCM1Q9NP62 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GCM1Q9NP62 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.45■□□□□ 0.7
GCM1Q9NP62 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.45■□□□□ 0.7
GCM1Q9NP62 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.45■□□□□ 0.7
GCM1Q9NP62 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GCM1Q9NP62 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GCM1Q9NP62 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GCM1Q9NP62 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GCM1Q9NP62 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.45■□□□□ 0.7
GCM1Q9NP62 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GCM1Q9NP62 AL161729.1-201ENST00000604104 1402 ntBASIC19.44■□□□□ 0.7
GCM1Q9NP62 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.44■□□□□ 0.7
GCM1Q9NP62 MTDHP2-201ENST00000601468 714 ntBASIC19.44■□□□□ 0.7
GCM1Q9NP62 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GCM1Q9NP62 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
GCM1Q9NP62 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GCM1Q9NP62 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GCM1Q9NP62 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.44■□□□□ 0.7
GCM1Q9NP62 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.44■□□□□ 0.7
GCM1Q9NP62 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GCM1Q9NP62 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GCM1Q9NP62 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GCM1Q9NP62 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GCM1Q9NP62 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GCM1Q9NP62 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GCM1Q9NP62 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GCM1Q9NP62 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.43■□□□□ 0.7
GCM1Q9NP62 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.43■□□□□ 0.7
GCM1Q9NP62 AC010997.5-201ENST00000609182 354 ntBASIC19.43■□□□□ 0.7
GCM1Q9NP62 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GCM1Q9NP62 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
GCM1Q9NP62 LINC01124-201ENST00000409786 2117 ntBASIC19.43■□□□□ 0.7
GCM1Q9NP62 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GCM1Q9NP62 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GCM1Q9NP62 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.43■□□□□ 0.7
GCM1Q9NP62 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.42■□□□□ 0.7
GCM1Q9NP62 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCM1Q9NP62 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCM1Q9NP62 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GCM1Q9NP62 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GCM1Q9NP62 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.42■□□□□ 0.7
GCM1Q9NP62 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GCM1Q9NP62 KRT16P3-201ENST00000439127 1283 ntBASIC19.42■□□□□ 0.7
GCM1Q9NP62 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCM1Q9NP62 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.42■□□□□ 0.7
GCM1Q9NP62 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCM1Q9NP62 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GCM1Q9NP62 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.42■□□□□ 0.7
GCM1Q9NP62 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GCM1Q9NP62 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCM1Q9NP62 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCM1Q9NP62 AL356441.2-201ENST00000443009 864 ntBASIC19.41■□□□□ 0.7
GCM1Q9NP62 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GCM1Q9NP62 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.41■□□□□ 0.7
GCM1Q9NP62 MIR6722-201ENST00000617286 78 ntBASIC19.41■□□□□ 0.7
GCM1Q9NP62 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCM1Q9NP62 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.41■□□□□ 0.7
GCM1Q9NP62 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GCM1Q9NP62 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GCM1Q9NP62 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCM1Q9NP62 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GCM1Q9NP62 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
GCM1Q9NP62 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.4■□□□□ 0.7
GCM1Q9NP62 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GCM1Q9NP62 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCM1Q9NP62 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GCM1Q9NP62 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GCM1Q9NP62 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
GCM1Q9NP62 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GCM1Q9NP62 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.39■□□□□ 0.69
GCM1Q9NP62 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.39■□□□□ 0.69
GCM1Q9NP62 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.39■□□□□ 0.69
GCM1Q9NP62 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.39■□□□□ 0.69
GCM1Q9NP62 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GCM1Q9NP62 LINC00543-201ENST00000567234 1845 ntBASIC19.39■□□□□ 0.69
GCM1Q9NP62 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms