Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC126544.1-201ENST00000580842 1059 ntBASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 AC009086.3-201ENST00000623486 1008 ntBASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 DUX4L6-201ENST00000626483 1275 ntBASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 DUX4L1-201ENST00000627662 1275 ntBASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 DUX4L8-201ENST00000629013 1275 ntBASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 DUX4L3-201ENST00000630187 1275 ntBASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 DUX4L7-201ENST00000630678 1275 ntBASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 DUX4L5-201ENST00000630834 1275 ntBASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
ZFYVE28Q9HCC9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 ID1-201ENST00000376105 1233 ntBASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 AC004911.1-201ENST00000416316 871 ntBASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZFYVE28Q9HCC9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
ZFYVE28Q9HCC9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ZFYVE28Q9HCC9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ZFYVE28Q9HCC9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
ZFYVE28Q9HCC9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC26.48■■□□□ 1.83
ZFYVE28Q9HCC9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.48■■□□□ 1.83
ZFYVE28Q9HCC9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.48■■□□□ 1.83
ZFYVE28Q9HCC9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.48■■□□□ 1.83
ZFYVE28Q9HCC9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZFYVE28Q9HCC9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZFYVE28Q9HCC9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.47■■□□□ 1.83
ZFYVE28Q9HCC9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.47■■□□□ 1.83
ZFYVE28Q9HCC9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.47■■□□□ 1.83
ZFYVE28Q9HCC9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ZFYVE28Q9HCC9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
ZFYVE28Q9HCC9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZFYVE28Q9HCC9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZFYVE28Q9HCC9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ZFYVE28Q9HCC9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.46■■□□□ 1.83
ZFYVE28Q9HCC9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ZFYVE28Q9HCC9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
ZFYVE28Q9HCC9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.46■■□□□ 1.83
ZFYVE28Q9HCC9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.46■■□□□ 1.83
ZFYVE28Q9HCC9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
ZFYVE28Q9HCC9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ZFYVE28Q9HCC9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.45■■□□□ 1.82
ZFYVE28Q9HCC9 ERN1-208ENST00000606895 2068 ntBASIC26.45■■□□□ 1.82
ZFYVE28Q9HCC9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
ZFYVE28Q9HCC9 AC142086.6-201ENST00000621154 1765 ntBASIC26.43■■□□□ 1.82
ZFYVE28Q9HCC9 TSPY26P-201ENST00000476365 1326 ntBASIC26.43■■□□□ 1.82
ZFYVE28Q9HCC9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ZFYVE28Q9HCC9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
ZFYVE28Q9HCC9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
ZFYVE28Q9HCC9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.43■■□□□ 1.82
ZFYVE28Q9HCC9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ZFYVE28Q9HCC9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
ZFYVE28Q9HCC9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ZFYVE28Q9HCC9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ZFYVE28Q9HCC9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.42■■□□□ 1.82
ZFYVE28Q9HCC9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.42■■□□□ 1.82
ZFYVE28Q9HCC9 AC123595.1-201ENST00000440769 1046 ntBASIC26.42■■□□□ 1.82
ZFYVE28Q9HCC9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ZFYVE28Q9HCC9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.42■■□□□ 1.82
ZFYVE28Q9HCC9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
ZFYVE28Q9HCC9 AL358852.1-201ENST00000623174 1268 ntBASIC26.42■■□□□ 1.82
ZFYVE28Q9HCC9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.42■■□□□ 1.82
ZFYVE28Q9HCC9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
ZFYVE28Q9HCC9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.41■■□□□ 1.82
ZFYVE28Q9HCC9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ZFYVE28Q9HCC9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
ZFYVE28Q9HCC9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.41■■□□□ 1.82
ZFYVE28Q9HCC9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC26.41■■□□□ 1.82
ZFYVE28Q9HCC9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
ZFYVE28Q9HCC9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ZFYVE28Q9HCC9 AC027612.3-201ENST00000413684 1047 ntBASIC26.4■■□□□ 1.82
ZFYVE28Q9HCC9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZFYVE28Q9HCC9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.4■■□□□ 1.82
ZFYVE28Q9HCC9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZFYVE28Q9HCC9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.4■■□□□ 1.82
ZFYVE28Q9HCC9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZFYVE28Q9HCC9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
ZFYVE28Q9HCC9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.39■■□□□ 1.82
ZFYVE28Q9HCC9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ZFYVE28Q9HCC9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
ZFYVE28Q9HCC9 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.39■■□□□ 1.82
ZFYVE28Q9HCC9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
ZFYVE28Q9HCC9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.39■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms