Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 AC004812.2-201ENST00000611079 2094 ntBASIC27.29■■□□□ 1.96
NBPF3Q9H094 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
NBPF3Q9H094 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NBPF3Q9H094 TSPY9P-201ENST00000440215 945 ntBASIC27.29■■□□□ 1.96
NBPF3Q9H094 TSPY11P-201ENST00000442607 1045 ntBASIC27.29■■□□□ 1.96
NBPF3Q9H094 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
NBPF3Q9H094 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.29■■□□□ 1.96
NBPF3Q9H094 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.29■■□□□ 1.96
NBPF3Q9H094 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
NBPF3Q9H094 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
NBPF3Q9H094 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.28■■□□□ 1.96
NBPF3Q9H094 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.28■■□□□ 1.96
NBPF3Q9H094 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.27■■□□□ 1.96
NBPF3Q9H094 AL022069.1-201ENST00000568025 1636 ntBASIC27.27■■□□□ 1.96
NBPF3Q9H094 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF3Q9H094 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF3Q9H094 AC131281.2-201ENST00000520478 145 ntBASIC27.27■■□□□ 1.96
NBPF3Q9H094 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF3Q9H094 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF3Q9H094 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
NBPF3Q9H094 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.27■■□□□ 1.96
NBPF3Q9H094 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
NBPF3Q9H094 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF3Q9H094 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
NBPF3Q9H094 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF3Q9H094 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC27.25■■□□□ 1.95
NBPF3Q9H094 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.25■■□□□ 1.95
NBPF3Q9H094 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
NBPF3Q9H094 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
NBPF3Q9H094 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF3Q9H094 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF3Q9H094 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF3Q9H094 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.24■■□□□ 1.95
NBPF3Q9H094 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.24■■□□□ 1.95
NBPF3Q9H094 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.24■■□□□ 1.95
NBPF3Q9H094 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.24■■□□□ 1.95
NBPF3Q9H094 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF3Q9H094 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
NBPF3Q9H094 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.24■■□□□ 1.95
NBPF3Q9H094 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
NBPF3Q9H094 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
NBPF3Q9H094 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
NBPF3Q9H094 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.23■■□□□ 1.95
NBPF3Q9H094 AL136116.3-201ENST00000402907 1138 ntBASIC27.23■■□□□ 1.95
NBPF3Q9H094 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.23■■□□□ 1.95
NBPF3Q9H094 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
NBPF3Q9H094 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
NBPF3Q9H094 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
NBPF3Q9H094 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NBPF3Q9H094 AC141586.4-201ENST00000624558 1573 ntBASIC27.22■■□□□ 1.95
NBPF3Q9H094 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.22■■□□□ 1.95
NBPF3Q9H094 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
NBPF3Q9H094 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.22■■□□□ 1.95
NBPF3Q9H094 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
NBPF3Q9H094 AC093323.1-202ENST00000635031 2045 ntBASIC27.21■■□□□ 1.95
NBPF3Q9H094 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.21■■□□□ 1.95
NBPF3Q9H094 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
NBPF3Q9H094 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
NBPF3Q9H094 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
NBPF3Q9H094 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
NBPF3Q9H094 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.2■■□□□ 1.94
NBPF3Q9H094 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.2■■□□□ 1.94
NBPF3Q9H094 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.2■■□□□ 1.94
NBPF3Q9H094 AC005837.3-201ENST00000612163 286 ntBASIC27.2■■□□□ 1.94
NBPF3Q9H094 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
NBPF3Q9H094 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.2■■□□□ 1.94
NBPF3Q9H094 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
NBPF3Q9H094 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
NBPF3Q9H094 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
NBPF3Q9H094 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
NBPF3Q9H094 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
NBPF3Q9H094 AL161729.1-201ENST00000604104 1402 ntBASIC27.19■■□□□ 1.94
NBPF3Q9H094 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
NBPF3Q9H094 MIR6722-201ENST00000617286 78 ntBASIC27.19■■□□□ 1.94
NBPF3Q9H094 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
NBPF3Q9H094 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.19■■□□□ 1.94
NBPF3Q9H094 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
NBPF3Q9H094 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
NBPF3Q9H094 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.18■■□□□ 1.94
NBPF3Q9H094 AC010997.5-201ENST00000609182 354 ntBASIC27.18■■□□□ 1.94
NBPF3Q9H094 AC110285.6-201ENST00000617652 491 ntBASIC27.18■■□□□ 1.94
NBPF3Q9H094 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
NBPF3Q9H094 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
NBPF3Q9H094 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
NBPF3Q9H094 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
NBPF3Q9H094 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.17■■□□□ 1.94
NBPF3Q9H094 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.17■■□□□ 1.94
NBPF3Q9H094 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.17■■□□□ 1.94
NBPF3Q9H094 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
NBPF3Q9H094 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.17■■□□□ 1.94
NBPF3Q9H094 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
NBPF3Q9H094 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
NBPF3Q9H094 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.16■■□□□ 1.94
NBPF3Q9H094 MTDHP2-201ENST00000601468 714 ntBASIC27.16■■□□□ 1.94
NBPF3Q9H094 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.16■■□□□ 1.94
NBPF3Q9H094 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
NBPF3Q9H094 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
NBPF3Q9H094 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
NBPF3Q9H094 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.16■■□□□ 1.94
NBPF3Q9H094 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms