Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TRIM62Q9BVG3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TRIM62Q9BVG3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
TRIM62Q9BVG3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM62Q9BVG3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.92■■□□□ 1.42
TRIM62Q9BVG3 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.92■■□□□ 1.42
TRIM62Q9BVG3 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.92■■□□□ 1.42
TRIM62Q9BVG3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM62Q9BVG3 ALDH1A3-203ENST00000557963 1670 ntBASIC23.92■■□□□ 1.42
TRIM62Q9BVG3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM62Q9BVG3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM62Q9BVG3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
TRIM62Q9BVG3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TRIM62Q9BVG3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM62Q9BVG3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM62Q9BVG3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.9■■□□□ 1.42
TRIM62Q9BVG3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
TRIM62Q9BVG3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM62Q9BVG3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TRIM62Q9BVG3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM62Q9BVG3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM62Q9BVG3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM62Q9BVG3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.89■■□□□ 1.42
TRIM62Q9BVG3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM62Q9BVG3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM62Q9BVG3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TRIM62Q9BVG3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM62Q9BVG3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.88■■□□□ 1.41
TRIM62Q9BVG3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM62Q9BVG3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM62Q9BVG3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TRIM62Q9BVG3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.87■■□□□ 1.41
TRIM62Q9BVG3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM62Q9BVG3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM62Q9BVG3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TRIM62Q9BVG3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM62Q9BVG3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TRIM62Q9BVG3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.87■■□□□ 1.41
TRIM62Q9BVG3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM62Q9BVG3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM62Q9BVG3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.86■■□□□ 1.41
TRIM62Q9BVG3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM62Q9BVG3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.85■■□□□ 1.41
TRIM62Q9BVG3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM62Q9BVG3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM62Q9BVG3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM62Q9BVG3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM62Q9BVG3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM62Q9BVG3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM62Q9BVG3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM62Q9BVG3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM62Q9BVG3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
TRIM62Q9BVG3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM62Q9BVG3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM62Q9BVG3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM62Q9BVG3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.83■■□□□ 1.41
TRIM62Q9BVG3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TRIM62Q9BVG3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.83■■□□□ 1.4
TRIM62Q9BVG3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM62Q9BVG3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 AL356740.2-201ENST00000601559 647 ntBASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM62Q9BVG3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM62Q9BVG3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM62Q9BVG3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM62Q9BVG3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM62Q9BVG3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM62Q9BVG3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM62Q9BVG3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM62Q9BVG3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.79■■□□□ 1.4
TRIM62Q9BVG3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM62Q9BVG3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.79■■□□□ 1.4
TRIM62Q9BVG3 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM62Q9BVG3 AL117332.1-201ENST00000622628 974 ntBASIC23.79■■□□□ 1.4
TRIM62Q9BVG3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms