Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
THUMPD3Q9BV44 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
THUMPD3Q9BV44 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
THUMPD3Q9BV44 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
THUMPD3Q9BV44 SPCS2P3-201ENST00000500401 656 ntBASIC21.74■■□□□ 1.07
THUMPD3Q9BV44 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
THUMPD3Q9BV44 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
THUMPD3Q9BV44 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.74■■□□□ 1.07
THUMPD3Q9BV44 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
THUMPD3Q9BV44 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.74■■□□□ 1.07
THUMPD3Q9BV44 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
THUMPD3Q9BV44 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 KRT18P60-201ENST00000312876 1297 ntBASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 AC018755.3-202ENST00000596210 929 ntBASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
THUMPD3Q9BV44 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 NTF6A-201ENST00000591175 560 ntBASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.72■■□□□ 1.07
THUMPD3Q9BV44 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.71■■□□□ 1.07
THUMPD3Q9BV44 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
THUMPD3Q9BV44 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 AC090877.2-201ENST00000558441 1738 ntBASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 DUX4L9-201ENST00000449051 1259 ntBASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 AC129492.7-201ENST00000622992 756 ntBASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
THUMPD3Q9BV44 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 ANOS2P-203ENST00000472227 1816 ntBASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
THUMPD3Q9BV44 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
THUMPD3Q9BV44 RPS2P7-201ENST00000447334 885 ntBASIC21.68■■□□□ 1.06
THUMPD3Q9BV44 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.68■■□□□ 1.06
THUMPD3Q9BV44 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
THUMPD3Q9BV44 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.68■■□□□ 1.06
THUMPD3Q9BV44 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
THUMPD3Q9BV44 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms