Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF5Q99942 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF5Q99942 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF5Q99942 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF5Q99942 AC021242.3-201ENST00000607598 1377 ntBASIC18.3■□□□□ 0.52
RNF5Q99942 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF5Q99942 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF5Q99942 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF5Q99942 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF5Q99942 Z92544.1-202ENST00000571933 1220 ntBASIC18.29■□□□□ 0.52
RNF5Q99942 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF5Q99942 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF5Q99942 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF5Q99942 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF5Q99942 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF5Q99942 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF5Q99942 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF5Q99942 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF5Q99942 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF5Q99942 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF5Q99942 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF5Q99942 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RNF5Q99942 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF5Q99942 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF5Q99942 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF5Q99942 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF5Q99942 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF5Q99942 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF5Q99942 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF5Q99942 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF5Q99942 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF5Q99942 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF5Q99942 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF5Q99942 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF5Q99942 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF5Q99942 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF5Q99942 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF5Q99942 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF5Q99942 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF5Q99942 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RNF5Q99942 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF5Q99942 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF5Q99942 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RNF5Q99942 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF5Q99942 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF5Q99942 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF5Q99942 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF5Q99942 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF5Q99942 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF5Q99942 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF5Q99942 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF5Q99942 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF5Q99942 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF5Q99942 SNX5-217ENST00000606557 1087 ntBASIC18.26■□□□□ 0.51
RNF5Q99942 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF5Q99942 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF5Q99942 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF5Q99942 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF5Q99942 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF5Q99942 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF5Q99942 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF5Q99942 MIR6722-201ENST00000617286 78 ntBASIC18.25■□□□□ 0.51
RNF5Q99942 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF5Q99942 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RNF5Q99942 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF5Q99942 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF5Q99942 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF5Q99942 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF5Q99942 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF5Q99942 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF5Q99942 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF5Q99942 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF5Q99942 RARRES2P1-201ENST00000474487 481 ntBASIC18.24■□□□□ 0.51
RNF5Q99942 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF5Q99942 KRT125P-201ENST00000546827 989 ntBASIC18.24■□□□□ 0.51
RNF5Q99942 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.24■□□□□ 0.51
RNF5Q99942 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF5Q99942 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF5Q99942 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RNF5Q99942 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF5Q99942 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF5Q99942 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF5Q99942 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF5Q99942 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF5Q99942 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF5Q99942 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF5Q99942 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF5Q99942 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF5Q99942 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF5Q99942 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF5Q99942 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF5Q99942 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF5Q99942 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RNF5Q99942 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF5Q99942 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF5Q99942 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF5Q99942 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RNF5Q99942 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
RNF5Q99942 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF5Q99942 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms