Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 KRT8P33-201ENST00000508125 1423 ntBASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHB18PQ96TA0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.36■■□□□ 1.49
PCDHB18PQ96TA0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB18PQ96TA0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB18PQ96TA0 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHB18PQ96TA0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDHB18PQ96TA0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHB18PQ96TA0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
PCDHB18PQ96TA0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PCDHB18PQ96TA0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB18PQ96TA0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHB18PQ96TA0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHB18PQ96TA0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB18PQ96TA0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHB18PQ96TA0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHB18PQ96TA0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHB18PQ96TA0 DUSP8P5-201ENST00000422884 1815 ntBASIC24.34■■□□□ 1.49
PCDHB18PQ96TA0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHB18PQ96TA0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PCDHB18PQ96TA0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHB18PQ96TA0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHB18PQ96TA0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDHB18PQ96TA0 AC103724.3-201ENST00000564481 992 ntBASIC24.33■■□□□ 1.49
PCDHB18PQ96TA0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
PCDHB18PQ96TA0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDHB18PQ96TA0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHB18PQ96TA0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHB18PQ96TA0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB18PQ96TA0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHB18PQ96TA0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB18PQ96TA0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB18PQ96TA0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHB18PQ96TA0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.32■■□□□ 1.48
PCDHB18PQ96TA0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
PCDHB18PQ96TA0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHB18PQ96TA0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHB18PQ96TA0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PCDHB18PQ96TA0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHB18PQ96TA0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PCDHB18PQ96TA0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHB18PQ96TA0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.31■■□□□ 1.48
PCDHB18PQ96TA0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHB18PQ96TA0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHB18PQ96TA0 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.29■■□□□ 1.48
PCDHB18PQ96TA0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PCDHB18PQ96TA0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHB18PQ96TA0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHB18PQ96TA0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHB18PQ96TA0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB18PQ96TA0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB18PQ96TA0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHB18PQ96TA0 ALDH1A3-203ENST00000557963 1670 ntBASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHB18PQ96TA0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB18PQ96TA0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PCDHB18PQ96TA0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
PCDHB18PQ96TA0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB18PQ96TA0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB18PQ96TA0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB18PQ96TA0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHB18PQ96TA0 AC133561.1-201ENST00000568600 2415 ntBASIC24.26■■□□□ 1.47
PCDHB18PQ96TA0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHB18PQ96TA0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB18PQ96TA0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.26■■□□□ 1.47
PCDHB18PQ96TA0 ANOS2P-203ENST00000472227 1816 ntBASIC24.26■■□□□ 1.47
PCDHB18PQ96TA0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
PCDHB18PQ96TA0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHB18PQ96TA0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms