Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CITED4Q96RK1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CITED4Q96RK1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CITED4Q96RK1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CITED4Q96RK1 AC016575.1-201ENST00000607026 382 ntBASIC19.41■□□□□ 0.7
CITED4Q96RK1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.41■□□□□ 0.7
CITED4Q96RK1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CITED4Q96RK1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CITED4Q96RK1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CITED4Q96RK1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.4■□□□□ 0.7
CITED4Q96RK1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CITED4Q96RK1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.4■□□□□ 0.7
CITED4Q96RK1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.4■□□□□ 0.7
CITED4Q96RK1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CITED4Q96RK1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CITED4Q96RK1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CITED4Q96RK1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CITED4Q96RK1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CITED4Q96RK1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CITED4Q96RK1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CITED4Q96RK1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CITED4Q96RK1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CITED4Q96RK1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.39■□□□□ 0.7
CITED4Q96RK1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CITED4Q96RK1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.39■□□□□ 0.7
CITED4Q96RK1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.39■□□□□ 0.69
CITED4Q96RK1 HSD17B1P1-201ENST00000590052 955 ntBASIC19.39■□□□□ 0.69
CITED4Q96RK1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.39■□□□□ 0.69
CITED4Q96RK1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CITED4Q96RK1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.39■□□□□ 0.69
CITED4Q96RK1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CITED4Q96RK1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CITED4Q96RK1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CITED4Q96RK1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.38■□□□□ 0.69
CITED4Q96RK1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CITED4Q96RK1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CITED4Q96RK1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CITED4Q96RK1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CITED4Q96RK1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CITED4Q96RK1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CITED4Q96RK1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CITED4Q96RK1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CITED4Q96RK1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CITED4Q96RK1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CITED4Q96RK1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.36■□□□□ 0.69
CITED4Q96RK1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CITED4Q96RK1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CITED4Q96RK1 AC141586.4-201ENST00000624558 1573 ntBASIC19.36■□□□□ 0.69
CITED4Q96RK1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CITED4Q96RK1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CITED4Q96RK1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.35■□□□□ 0.69
CITED4Q96RK1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CITED4Q96RK1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CITED4Q96RK1 AF106564.1-201ENST00000607058 2553 ntBASIC19.35■□□□□ 0.69
CITED4Q96RK1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CITED4Q96RK1 LINC01971-201ENST00000617888 1048 ntBASIC19.35■□□□□ 0.69
CITED4Q96RK1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CITED4Q96RK1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.35■□□□□ 0.69
CITED4Q96RK1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CITED4Q96RK1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CITED4Q96RK1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CITED4Q96RK1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CITED4Q96RK1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.34■□□□□ 0.69
CITED4Q96RK1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.34■□□□□ 0.69
CITED4Q96RK1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CITED4Q96RK1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.34■□□□□ 0.69
CITED4Q96RK1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CITED4Q96RK1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CITED4Q96RK1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CITED4Q96RK1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CITED4Q96RK1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CITED4Q96RK1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CITED4Q96RK1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CITED4Q96RK1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.34■□□□□ 0.69
CITED4Q96RK1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CITED4Q96RK1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CITED4Q96RK1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CITED4Q96RK1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CITED4Q96RK1 DUX4L11-201ENST00000611504 1267 ntBASIC19.33■□□□□ 0.68
CITED4Q96RK1 DUX4L12-201ENST00000614593 1267 ntBASIC19.33■□□□□ 0.68
CITED4Q96RK1 DUX4L14-201ENST00000621227 1267 ntBASIC19.33■□□□□ 0.68
CITED4Q96RK1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CITED4Q96RK1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CITED4Q96RK1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CITED4Q96RK1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CITED4Q96RK1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.33■□□□□ 0.68
CITED4Q96RK1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CITED4Q96RK1 AC004812.2-201ENST00000611079 2094 ntBASIC19.32■□□□□ 0.68
CITED4Q96RK1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms