Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
HIST1H2AAQ96QV6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H2AAQ96QV6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H2AAQ96QV6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H2AAQ96QV6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H2AAQ96QV6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIST1H2AAQ96QV6 AL022069.1-201ENST00000568025 1636 ntBASIC19.73■□□□□ 0.75
HIST1H2AAQ96QV6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 KRT18P24-201ENST00000344739 1156 ntBASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 YBX1P4-201ENST00000392794 808 ntBASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 AC120024.1-201ENST00000562672 995 ntBASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIST1H2AAQ96QV6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 PVT1_1.1-201ENST00000615125 194 ntBASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.71■□□□□ 0.75
HIST1H2AAQ96QV6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST1H2AAQ96QV6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 ABCB10P4-201ENST00000566803 2184 ntBASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST1H2AAQ96QV6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 MIR4508-201ENST00000584178 70 ntBASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST1H2AAQ96QV6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST1H2AAQ96QV6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AAQ96QV6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AAQ96QV6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AAQ96QV6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AAQ96QV6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HIST1H2AAQ96QV6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AAQ96QV6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIST1H2AAQ96QV6 KRT8P33-201ENST00000508125 1423 ntBASIC19.66■□□□□ 0.74
HIST1H2AAQ96QV6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms