Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.7■□□□□ 0.74
CMTM3Q96MX0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CMTM3Q96MX0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CMTM3Q96MX0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.68■□□□□ 0.74
CMTM3Q96MX0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 AL157400.5-201ENST00000507624 621 ntBASIC19.67■□□□□ 0.74
CMTM3Q96MX0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CMTM3Q96MX0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.66■□□□□ 0.74
CMTM3Q96MX0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CMTM3Q96MX0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.66■□□□□ 0.74
CMTM3Q96MX0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.66■□□□□ 0.74
CMTM3Q96MX0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CMTM3Q96MX0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CMTM3Q96MX0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CMTM3Q96MX0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.65■□□□□ 0.74
CMTM3Q96MX0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CMTM3Q96MX0 SMPD5-203ENST00000639008 1464 ntBASIC19.65■□□□□ 0.74
CMTM3Q96MX0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.65■□□□□ 0.74
CMTM3Q96MX0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CMTM3Q96MX0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CMTM3Q96MX0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CMTM3Q96MX0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.63■□□□□ 0.73
CMTM3Q96MX0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.62■□□□□ 0.73
CMTM3Q96MX0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms