Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COX4I2Q96KJ9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COX4I2Q96KJ9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
COX4I2Q96KJ9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.99■□□□□ 0.95
COX4I2Q96KJ9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COX4I2Q96KJ9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 DUX4L9-201ENST00000449051 1259 ntBASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 AC010980.1-201ENST00000587192 1142 ntBASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 AC026202.3-201ENST00000600805 1127 ntBASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.98■□□□□ 0.95
COX4I2Q96KJ9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 KRT8P33-201ENST00000508125 1423 ntBASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 SMPD5-203ENST00000639008 1464 ntBASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COX4I2Q96KJ9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I2Q96KJ9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I2Q96KJ9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I2Q96KJ9 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.96■□□□□ 0.95
COX4I2Q96KJ9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
COX4I2Q96KJ9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.96■□□□□ 0.95
COX4I2Q96KJ9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.96■□□□□ 0.95
COX4I2Q96KJ9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COX4I2Q96KJ9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.96■□□□□ 0.95
COX4I2Q96KJ9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
COX4I2Q96KJ9 AC142472.1-201ENST00000612013 1741 ntBASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COX4I2Q96KJ9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COX4I2Q96KJ9 PKD1P6-201ENST00000343738 4769 ntBASIC20.94■□□□□ 0.94
COX4I2Q96KJ9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COX4I2Q96KJ9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
COX4I2Q96KJ9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COX4I2Q96KJ9 THA1P-201ENST00000590384 1145 ntBASIC20.94■□□□□ 0.94
COX4I2Q96KJ9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COX4I2Q96KJ9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COX4I2Q96KJ9 AC141586.4-201ENST00000624558 1573 ntBASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 AC127496.7-201ENST00000625110 1798 ntBASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 GUSBP5-201ENST00000418136 578 ntBASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.93■□□□□ 0.94
COX4I2Q96KJ9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 YBX1P4-201ENST00000392794 808 ntBASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COX4I2Q96KJ9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 RNF165-205ENST00000588679 2904 ntBASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.91■□□□□ 0.94
COX4I2Q96KJ9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COX4I2Q96KJ9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms