Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TIMD4Q96H15 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMD4Q96H15 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.21■□□□□ 0.67
TIMD4Q96H15 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TIMD4Q96H15 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TIMD4Q96H15 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMD4Q96H15 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TIMD4Q96H15 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TIMD4Q96H15 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.2■□□□□ 0.66
TIMD4Q96H15 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMD4Q96H15 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMD4Q96H15 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.2■□□□□ 0.66
TIMD4Q96H15 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TIMD4Q96H15 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.2■□□□□ 0.66
TIMD4Q96H15 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMD4Q96H15 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMD4Q96H15 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TIMD4Q96H15 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TIMD4Q96H15 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.19■□□□□ 0.66
TIMD4Q96H15 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMD4Q96H15 SRD5A1P1-201ENST00000442297 786 ntBASIC19.19■□□□□ 0.66
TIMD4Q96H15 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMD4Q96H15 AC142381.3-201ENST00000568208 1670 ntBASIC19.19■□□□□ 0.66
TIMD4Q96H15 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMD4Q96H15 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMD4Q96H15 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TIMD4Q96H15 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.19■□□□□ 0.66
TIMD4Q96H15 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TIMD4Q96H15 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMD4Q96H15 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMD4Q96H15 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TIMD4Q96H15 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMD4Q96H15 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMD4Q96H15 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMD4Q96H15 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.18■□□□□ 0.66
TIMD4Q96H15 AL512631.2-201ENST00000604634 923 ntBASIC19.18■□□□□ 0.66
TIMD4Q96H15 MIR4466-201ENST00000606121 54 ntBASIC19.18■□□□□ 0.66
TIMD4Q96H15 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TIMD4Q96H15 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.18■□□□□ 0.66
TIMD4Q96H15 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMD4Q96H15 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMD4Q96H15 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TIMD4Q96H15 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.18■□□□□ 0.66
TIMD4Q96H15 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.17■□□□□ 0.66
TIMD4Q96H15 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TIMD4Q96H15 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TIMD4Q96H15 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.17■□□□□ 0.66
TIMD4Q96H15 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TIMD4Q96H15 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TIMD4Q96H15 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMD4Q96H15 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMD4Q96H15 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TIMD4Q96H15 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.16■□□□□ 0.66
TIMD4Q96H15 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.16■□□□□ 0.66
TIMD4Q96H15 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.16■□□□□ 0.66
TIMD4Q96H15 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.16■□□□□ 0.66
TIMD4Q96H15 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TIMD4Q96H15 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMD4Q96H15 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TIMD4Q96H15 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TIMD4Q96H15 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
TIMD4Q96H15 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.16■□□□□ 0.66
TIMD4Q96H15 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TIMD4Q96H15 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.15■□□□□ 0.66
TIMD4Q96H15 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.15■□□□□ 0.66
TIMD4Q96H15 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TIMD4Q96H15 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TIMD4Q96H15 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TIMD4Q96H15 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TIMD4Q96H15 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TIMD4Q96H15 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TIMD4Q96H15 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.14■□□□□ 0.65
TIMD4Q96H15 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIMD4Q96H15 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TIMD4Q96H15 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.14■□□□□ 0.65
TIMD4Q96H15 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TIMD4Q96H15 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMD4Q96H15 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMD4Q96H15 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIMD4Q96H15 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIMD4Q96H15 AL139246.5-201ENST00000606645 996 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms