Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLDN23Q96B33 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CLDN23Q96B33 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CLDN23Q96B33 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN23Q96B33 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN23Q96B33 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN23Q96B33 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN23Q96B33 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.2■■□□□ 1.3
CLDN23Q96B33 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.2■■□□□ 1.3
CLDN23Q96B33 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.2■■□□□ 1.3
CLDN23Q96B33 AL031602.1-201ENST00000633169 911 ntBASIC23.2■■□□□ 1.3
CLDN23Q96B33 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLDN23Q96B33 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CLDN23Q96B33 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CLDN23Q96B33 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN23Q96B33 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN23Q96B33 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLDN23Q96B33 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.19■■□□□ 1.3
CLDN23Q96B33 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.19■■□□□ 1.3
CLDN23Q96B33 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.18■■□□□ 1.3
CLDN23Q96B33 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.18■■□□□ 1.3
CLDN23Q96B33 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN23Q96B33 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN23Q96B33 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN23Q96B33 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN23Q96B33 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN23Q96B33 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.18■■□□□ 1.3
CLDN23Q96B33 DUX4L2-201ENST00000561772 1275 ntBASIC23.18■■□□□ 1.3
CLDN23Q96B33 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.18■■□□□ 1.3
CLDN23Q96B33 AC009086.3-201ENST00000623486 1008 ntBASIC23.18■■□□□ 1.3
CLDN23Q96B33 DUX4L6-201ENST00000626483 1275 ntBASIC23.18■■□□□ 1.3
CLDN23Q96B33 DUX4L1-201ENST00000627662 1275 ntBASIC23.18■■□□□ 1.3
CLDN23Q96B33 DUX4L8-201ENST00000629013 1275 ntBASIC23.18■■□□□ 1.3
CLDN23Q96B33 DUX4L3-201ENST00000630187 1275 ntBASIC23.18■■□□□ 1.3
CLDN23Q96B33 DUX4L7-201ENST00000630678 1275 ntBASIC23.18■■□□□ 1.3
CLDN23Q96B33 DUX4L5-201ENST00000630834 1275 ntBASIC23.18■■□□□ 1.3
CLDN23Q96B33 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.18■■□□□ 1.3
CLDN23Q96B33 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLDN23Q96B33 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN23Q96B33 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN23Q96B33 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CLDN23Q96B33 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.17■■□□□ 1.3
CLDN23Q96B33 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLDN23Q96B33 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.16■■□□□ 1.3
CLDN23Q96B33 AC010501.1-201ENST00000606270 1962 ntBASIC23.16■■□□□ 1.3
CLDN23Q96B33 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN23Q96B33 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN23Q96B33 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN23Q96B33 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.16■■□□□ 1.3
CLDN23Q96B33 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.16■■□□□ 1.3
CLDN23Q96B33 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.16■■□□□ 1.3
CLDN23Q96B33 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN23Q96B33 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLDN23Q96B33 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.16■■□□□ 1.3
CLDN23Q96B33 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN23Q96B33 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CLDN23Q96B33 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CLDN23Q96B33 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.15■■□□□ 1.3
CLDN23Q96B33 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CLDN23Q96B33 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CLDN23Q96B33 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.14■■□□□ 1.3
CLDN23Q96B33 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CLDN23Q96B33 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.14■■□□□ 1.29
CLDN23Q96B33 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN23Q96B33 AC123595.1-201ENST00000440769 1046 ntBASIC23.14■■□□□ 1.29
CLDN23Q96B33 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
CLDN23Q96B33 AC126544.1-201ENST00000580842 1059 ntBASIC23.14■■□□□ 1.29
CLDN23Q96B33 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN23Q96B33 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
CLDN23Q96B33 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CLDN23Q96B33 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 AL022069.1-201ENST00000568025 1636 ntBASIC23.13■■□□□ 1.29
CLDN23Q96B33 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN23Q96B33 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN23Q96B33 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 AC027612.3-201ENST00000413684 1047 ntBASIC23.13■■□□□ 1.29
CLDN23Q96B33 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN23Q96B33 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN23Q96B33 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CLDN23Q96B33 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CLDN23Q96B33 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN23Q96B33 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CLDN23Q96B33 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.12■■□□□ 1.29
CLDN23Q96B33 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CLDN23Q96B33 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CLDN23Q96B33 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.12■■□□□ 1.29
CLDN23Q96B33 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.12■■□□□ 1.29
CLDN23Q96B33 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.12■■□□□ 1.29
CLDN23Q96B33 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.12■■□□□ 1.29
CLDN23Q96B33 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.12■■□□□ 1.29
CLDN23Q96B33 AL358852.1-201ENST00000623174 1268 ntBASIC23.12■■□□□ 1.29
CLDN23Q96B33 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms