Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATP6V0A1Q93050 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
ATP6V0A1Q93050 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATP6V0A1Q93050 AL161729.1-201ENST00000604104 1402 ntBASIC25.73■■□□□ 1.71
ATP6V0A1Q93050 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATP6V0A1Q93050 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V0A1Q93050 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
ATP6V0A1Q93050 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V0A1Q93050 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.72■■□□□ 1.71
ATP6V0A1Q93050 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V0A1Q93050 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V0A1Q93050 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V0A1Q93050 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP6V0A1Q93050 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ATP6V0A1Q93050 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.71■■□□□ 1.71
ATP6V0A1Q93050 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ATP6V0A1Q93050 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.71■■□□□ 1.71
ATP6V0A1Q93050 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ATP6V0A1Q93050 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
ATP6V0A1Q93050 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
ATP6V0A1Q93050 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V0A1Q93050 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.7
ATP6V0A1Q93050 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.7■■□□□ 1.7
ATP6V0A1Q93050 PBX2P1-201ENST00000493219 1291 ntBASIC25.7■■□□□ 1.7
ATP6V0A1Q93050 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V0A1Q93050 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ATP6V0A1Q93050 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
ATP6V0A1Q93050 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ATP6V0A1Q93050 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
ATP6V0A1Q93050 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.69■■□□□ 1.7
ATP6V0A1Q93050 AC106739.1-201ENST00000617035 715 ntBASIC25.69■■□□□ 1.7
ATP6V0A1Q93050 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
ATP6V0A1Q93050 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.68■■□□□ 1.7
ATP6V0A1Q93050 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V0A1Q93050 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V0A1Q93050 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP6V0A1Q93050 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 SRD5A1P1-201ENST00000442297 786 ntBASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ATP6V0A1Q93050 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATP6V0A1Q93050 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
ATP6V0A1Q93050 AC005703.6-201ENST00000623265 1329 ntBASIC25.66■■□□□ 1.7
ATP6V0A1Q93050 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATP6V0A1Q93050 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATP6V0A1Q93050 UNC93B3-201ENST00000308076 687 ntBASIC25.66■■□□□ 1.7
ATP6V0A1Q93050 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
ATP6V0A1Q93050 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.66■■□□□ 1.7
ATP6V0A1Q93050 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATP6V0A1Q93050 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
ATP6V0A1Q93050 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
ATP6V0A1Q93050 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ATP6V0A1Q93050 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
ATP6V0A1Q93050 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.65■■□□□ 1.7
ATP6V0A1Q93050 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ATP6V0A1Q93050 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.64■■□□□ 1.7
ATP6V0A1Q93050 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
ATP6V0A1Q93050 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.64■■□□□ 1.69
ATP6V0A1Q93050 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATP6V0A1Q93050 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATP6V0A1Q93050 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.63■■□□□ 1.69
ATP6V0A1Q93050 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.63■■□□□ 1.69
ATP6V0A1Q93050 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ATP6V0A1Q93050 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATP6V0A1Q93050 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
ATP6V0A1Q93050 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.63■■□□□ 1.69
ATP6V0A1Q93050 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.62■■□□□ 1.69
ATP6V0A1Q93050 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ATP6V0A1Q93050 AL136162.1-201ENST00000607711 1078 ntBASIC25.62■■□□□ 1.69
ATP6V0A1Q93050 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ATP6V0A1Q93050 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 AC135731.1-201ENST00000569415 2548 ntBASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.61■■□□□ 1.69
ATP6V0A1Q93050 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms