Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
USP6NLQ92738 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
USP6NLQ92738 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
USP6NLQ92738 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
USP6NLQ92738 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
USP6NLQ92738 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
USP6NLQ92738 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.14■■□□□ 1.78
USP6NLQ92738 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
USP6NLQ92738 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
USP6NLQ92738 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.13■■□□□ 1.77
USP6NLQ92738 AC241377.3-202ENST00000626088 1088 ntBASIC26.13■■□□□ 1.77
USP6NLQ92738 AC241585.3-202ENST00000628937 1088 ntBASIC26.13■■□□□ 1.77
USP6NLQ92738 AC245100.8-202ENST00000629247 1058 ntBASIC26.13■■□□□ 1.77
USP6NLQ92738 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.13■■□□□ 1.77
USP6NLQ92738 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
USP6NLQ92738 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
USP6NLQ92738 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.12■■□□□ 1.77
USP6NLQ92738 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
USP6NLQ92738 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.12■■□□□ 1.77
USP6NLQ92738 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.12■■□□□ 1.77
USP6NLQ92738 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
USP6NLQ92738 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
USP6NLQ92738 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
USP6NLQ92738 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
USP6NLQ92738 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
USP6NLQ92738 AC006455.2-201ENST00000429931 906 ntBASIC26.11■■□□□ 1.77
USP6NLQ92738 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.11■■□□□ 1.77
USP6NLQ92738 AC233992.3-201ENST00000607491 485 ntBASIC26.11■■□□□ 1.77
USP6NLQ92738 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
USP6NLQ92738 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
USP6NLQ92738 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
USP6NLQ92738 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
USP6NLQ92738 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.1■■□□□ 1.77
USP6NLQ92738 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.1■■□□□ 1.77
USP6NLQ92738 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
USP6NLQ92738 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.09■■□□□ 1.77
USP6NLQ92738 BX842568.3-201ENST00000418104 571 ntBASIC26.09■■□□□ 1.77
USP6NLQ92738 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.09■■□□□ 1.77
USP6NLQ92738 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.09■■□□□ 1.77
USP6NLQ92738 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
USP6NLQ92738 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.08■■□□□ 1.77
USP6NLQ92738 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.08■■□□□ 1.77
USP6NLQ92738 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
USP6NLQ92738 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.07■■□□□ 1.76
USP6NLQ92738 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
USP6NLQ92738 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
USP6NLQ92738 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
USP6NLQ92738 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
USP6NLQ92738 MIR3181-201ENST00000578512 73 ntBASIC26.07■■□□□ 1.76
USP6NLQ92738 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
USP6NLQ92738 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
USP6NLQ92738 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
USP6NLQ92738 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.07■■□□□ 1.76
USP6NLQ92738 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
USP6NLQ92738 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
USP6NLQ92738 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
USP6NLQ92738 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
USP6NLQ92738 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.06■■□□□ 1.76
USP6NLQ92738 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
USP6NLQ92738 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.06■■□□□ 1.76
USP6NLQ92738 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
USP6NLQ92738 MIR6089-201ENST00000616698 64 ntBASIC26.06■■□□□ 1.76
USP6NLQ92738 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.06■■□□□ 1.76
USP6NLQ92738 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
USP6NLQ92738 SLC6A10P-202ENST00000431994 2058 ntBASIC26.06■■□□□ 1.76
USP6NLQ92738 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
USP6NLQ92738 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
USP6NLQ92738 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.05■■□□□ 1.76
USP6NLQ92738 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
USP6NLQ92738 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
USP6NLQ92738 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
USP6NLQ92738 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
USP6NLQ92738 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
USP6NLQ92738 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
USP6NLQ92738 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
USP6NLQ92738 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.05■■□□□ 1.76
USP6NLQ92738 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.05■■□□□ 1.76
USP6NLQ92738 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.05■■□□□ 1.76
USP6NLQ92738 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.05■■□□□ 1.76
USP6NLQ92738 AL022069.1-201ENST00000568025 1636 ntBASIC26.04■■□□□ 1.76
USP6NLQ92738 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
USP6NLQ92738 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.04■■□□□ 1.76
USP6NLQ92738 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.04■■□□□ 1.76
USP6NLQ92738 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
USP6NLQ92738 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
USP6NLQ92738 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
USP6NLQ92738 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
USP6NLQ92738 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USP6NLQ92738 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.03■■□□□ 1.76
USP6NLQ92738 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USP6NLQ92738 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
USP6NLQ92738 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
USP6NLQ92738 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USP6NLQ92738 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.03■■□□□ 1.76
USP6NLQ92738 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USP6NLQ92738 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
USP6NLQ92738 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.03■■□□□ 1.76
USP6NLQ92738 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.03■■□□□ 1.76
USP6NLQ92738 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
USP6NLQ92738 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms