Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC30.32■■■□□ 2.44
RAPGEF4Q8WZA2 MIR6821-201ENST00000617625 74 ntBASIC30.32■■■□□ 2.44
RAPGEF4Q8WZA2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC30.32■■■□□ 2.44
RAPGEF4Q8WZA2 C17orf82-201ENST00000623772 1530 ntBASIC30.32■■■□□ 2.44
RAPGEF4Q8WZA2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RAPGEF4Q8WZA2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RAPGEF4Q8WZA2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC30.31■■■□□ 2.44
RAPGEF4Q8WZA2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RAPGEF4Q8WZA2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
RAPGEF4Q8WZA2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC30.3■■■□□ 2.44
RAPGEF4Q8WZA2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
RAPGEF4Q8WZA2 AC008764.7-201ENST00000593779 1081 ntBASIC30.3■■■□□ 2.44
RAPGEF4Q8WZA2 DUSP8P4-201ENST00000399538 1761 ntBASIC30.3■■■□□ 2.44
RAPGEF4Q8WZA2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 AC241377.3-202ENST00000626088 1088 ntBASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 AC241585.3-202ENST00000628937 1088 ntBASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 AC245100.8-202ENST00000629247 1058 ntBASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.29■■■□□ 2.44
RAPGEF4Q8WZA2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RAPGEF4Q8WZA2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
RAPGEF4Q8WZA2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RAPGEF4Q8WZA2 AC097381.1-201ENST00000429019 1296 ntBASIC30.28■■■□□ 2.44
RAPGEF4Q8WZA2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC30.28■■■□□ 2.44
RAPGEF4Q8WZA2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
RAPGEF4Q8WZA2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RAPGEF4Q8WZA2 HES6-206ENST00000409574 738 ntTSL 2 BASIC30.27■■■□□ 2.44
RAPGEF4Q8WZA2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
RAPGEF4Q8WZA2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
RAPGEF4Q8WZA2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
RAPGEF4Q8WZA2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
RAPGEF4Q8WZA2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RAPGEF4Q8WZA2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
RAPGEF4Q8WZA2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RAPGEF4Q8WZA2 AC099791.1-201ENST00000416440 715 ntBASIC30.26■■■□□ 2.43
RAPGEF4Q8WZA2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
RAPGEF4Q8WZA2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
RAPGEF4Q8WZA2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
RAPGEF4Q8WZA2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
RAPGEF4Q8WZA2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RAPGEF4Q8WZA2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC30.25■■■□□ 2.43
RAPGEF4Q8WZA2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC30.25■■■□□ 2.43
RAPGEF4Q8WZA2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RAPGEF4Q8WZA2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.25■■■□□ 2.43
RAPGEF4Q8WZA2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 AC136469.2-201ENST00000623944 1028 ntBASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RAPGEF4Q8WZA2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF4Q8WZA2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
RAPGEF4Q8WZA2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.23■■■□□ 2.43
RAPGEF4Q8WZA2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF4Q8WZA2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF4Q8WZA2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC30.23■■■□□ 2.43
RAPGEF4Q8WZA2 AC087623.3-201ENST00000607047 1098 ntBASIC30.23■■■□□ 2.43
RAPGEF4Q8WZA2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.23■■■□□ 2.43
RAPGEF4Q8WZA2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
RAPGEF4Q8WZA2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 AC006455.2-201ENST00000429931 906 ntBASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
RAPGEF4Q8WZA2 IRS3P-201ENST00000223076 1006 ntBASIC30.21■■■□□ 2.43
RAPGEF4Q8WZA2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RAPGEF4Q8WZA2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RAPGEF4Q8WZA2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC30.21■■■□□ 2.43
RAPGEF4Q8WZA2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.21■■■□□ 2.43
RAPGEF4Q8WZA2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
RAPGEF4Q8WZA2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC30.21■■■□□ 2.43
RAPGEF4Q8WZA2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RAPGEF4Q8WZA2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RAPGEF4Q8WZA2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
RAPGEF4Q8WZA2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RAPGEF4Q8WZA2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.2■■■□□ 2.43
RAPGEF4Q8WZA2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC30.2■■■□□ 2.43
RAPGEF4Q8WZA2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
RAPGEF4Q8WZA2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.2■■■□□ 2.43
RAPGEF4Q8WZA2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RAPGEF4Q8WZA2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
RAPGEF4Q8WZA2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF4Q8WZA2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF4Q8WZA2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF4Q8WZA2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC30.19■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms