Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AC009102.2-201ENST00000606772 1639 ntBASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 ZNRF2P3-201ENST00000424200 374 ntBASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 AC142381.2-201ENST00000566120 298 ntBASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.12■■□□□ 1.61
TMEM40Q8WWA1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TMEM40Q8WWA1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.11■■□□□ 1.61
TMEM40Q8WWA1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.11■■□□□ 1.61
TMEM40Q8WWA1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.11■■□□□ 1.61
TMEM40Q8WWA1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TMEM40Q8WWA1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.11■■□□□ 1.61
TMEM40Q8WWA1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.1■■□□□ 1.61
TMEM40Q8WWA1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TMEM40Q8WWA1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
TMEM40Q8WWA1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
TMEM40Q8WWA1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.08■■□□□ 1.61
TMEM40Q8WWA1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.08■■□□□ 1.61
TMEM40Q8WWA1 AC022211.4-201ENST00000625094 2161 ntBASIC25.08■■□□□ 1.61
TMEM40Q8WWA1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.08■■□□□ 1.6
TMEM40Q8WWA1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TMEM40Q8WWA1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
TMEM40Q8WWA1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMEM40Q8WWA1 EDA-201ENST00000338901 1233 ntBASIC25.07■■□□□ 1.6
TMEM40Q8WWA1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TMEM40Q8WWA1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TMEM40Q8WWA1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.07■■□□□ 1.6
TMEM40Q8WWA1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
TMEM40Q8WWA1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 AC099791.2-201ENST00000605725 427 ntBASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TMEM40Q8WWA1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 AL355001.2-201ENST00000620617 1191 ntBASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
TMEM40Q8WWA1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TMEM40Q8WWA1 SERBP1P1-201ENST00000396021 1160 ntBASIC25.04■■□□□ 1.6
TMEM40Q8WWA1 DUX4L19-201ENST00000557448 1267 ntBASIC25.04■■□□□ 1.6
TMEM40Q8WWA1 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.04■■□□□ 1.6
TMEM40Q8WWA1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TMEM40Q8WWA1 SYT6-210ENST00000641643 1587 ntBASIC25.04■■□□□ 1.6
TMEM40Q8WWA1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.04■■□□□ 1.6
TMEM40Q8WWA1 AC135731.1-201ENST00000569415 2548 ntBASIC25.04■■□□□ 1.6
TMEM40Q8WWA1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMEM40Q8WWA1 C17orf82-201ENST00000623772 1530 ntBASIC25.03■■□□□ 1.6
TMEM40Q8WWA1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TMEM40Q8WWA1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.03■■□□□ 1.6
TMEM40Q8WWA1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.03■■□□□ 1.6
TMEM40Q8WWA1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
TMEM40Q8WWA1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TMEM40Q8WWA1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 AF213884.3-201ENST00000563833 479 ntBASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 AL136967.2-201ENST00000623968 743 ntBASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TMEM40Q8WWA1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TMEM40Q8WWA1 MIR4767-201ENST00000582827 78 ntBASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms