Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 MIR6724-3-201ENST00000622482 92 ntBASIC24.03■■□□□ 1.44
RNF139Q8WU17 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF139Q8WU17 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF139Q8WU17 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF139Q8WU17 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF139Q8WU17 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF139Q8WU17 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF139Q8WU17 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.02■■□□□ 1.44
RNF139Q8WU17 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.02■■□□□ 1.44
RNF139Q8WU17 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF139Q8WU17 AL161729.1-201ENST00000604104 1402 ntBASIC24.01■■□□□ 1.43
RNF139Q8WU17 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF139Q8WU17 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RNF139Q8WU17 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
RNF139Q8WU17 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF139Q8WU17 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF139Q8WU17 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF139Q8WU17 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF139Q8WU17 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.01■■□□□ 1.43
RNF139Q8WU17 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF139Q8WU17 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
RNF139Q8WU17 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF139Q8WU17 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
RNF139Q8WU17 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24■■□□□ 1.43
RNF139Q8WU17 AC141586.4-201ENST00000624558 1573 ntBASIC24■■□□□ 1.43
RNF139Q8WU17 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF139Q8WU17 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24■■□□□ 1.43
RNF139Q8WU17 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF139Q8WU17 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24■■□□□ 1.43
RNF139Q8WU17 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF139Q8WU17 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF139Q8WU17 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
RNF139Q8WU17 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF139Q8WU17 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF139Q8WU17 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.99■■□□□ 1.43
RNF139Q8WU17 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF139Q8WU17 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.99■■□□□ 1.43
RNF139Q8WU17 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF139Q8WU17 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF139Q8WU17 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
RNF139Q8WU17 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF139Q8WU17 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF139Q8WU17 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RNF139Q8WU17 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF139Q8WU17 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF139Q8WU17 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF139Q8WU17 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF139Q8WU17 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF139Q8WU17 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF139Q8WU17 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.98■■□□□ 1.43
RNF139Q8WU17 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF139Q8WU17 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RNF139Q8WU17 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF139Q8WU17 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
RNF139Q8WU17 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF139Q8WU17 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF139Q8WU17 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.97■■□□□ 1.43
RNF139Q8WU17 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF139Q8WU17 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF139Q8WU17 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.97■■□□□ 1.43
RNF139Q8WU17 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF139Q8WU17 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.97■■□□□ 1.43
RNF139Q8WU17 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.97■■□□□ 1.43
RNF139Q8WU17 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
RNF139Q8WU17 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.97■■□□□ 1.43
RNF139Q8WU17 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RNF139Q8WU17 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF139Q8WU17 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
RNF139Q8WU17 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF139Q8WU17 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF139Q8WU17 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF139Q8WU17 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF139Q8WU17 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.96■■□□□ 1.43
RNF139Q8WU17 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF139Q8WU17 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF139Q8WU17 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF139Q8WU17 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
RNF139Q8WU17 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
RNF139Q8WU17 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.95■■□□□ 1.42
RNF139Q8WU17 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.95■■□□□ 1.42
RNF139Q8WU17 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RNF139Q8WU17 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.95■■□□□ 1.42
RNF139Q8WU17 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RNF139Q8WU17 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF139Q8WU17 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.94■■□□□ 1.42
RNF139Q8WU17 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RNF139Q8WU17 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF139Q8WU17 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF139Q8WU17 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF139Q8WU17 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RNF139Q8WU17 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.93■■□□□ 1.42
RNF139Q8WU17 AL356740.2-201ENST00000601559 647 ntBASIC23.93■■□□□ 1.42
RNF139Q8WU17 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF139Q8WU17 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF139Q8WU17 AC005703.6-201ENST00000623265 1329 ntBASIC23.92■■□□□ 1.42
RNF139Q8WU17 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF139Q8WU17 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RNF139Q8WU17 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF139Q8WU17 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF139Q8WU17 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms