Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RPS4Y2Q8TD47 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
RPS4Y2Q8TD47 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4Y2Q8TD47 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4Y2Q8TD47 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RPS4Y2Q8TD47 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RPS4Y2Q8TD47 AC009831.1-201ENST00000580420 1582 ntBASIC20.06■□□□□ 0.8
RPS4Y2Q8TD47 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.06■□□□□ 0.8
RPS4Y2Q8TD47 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.06■□□□□ 0.8
RPS4Y2Q8TD47 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RPS4Y2Q8TD47 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 RARRES2P2-201ENST00000394842 485 ntBASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 RPS2P7-201ENST00000447334 885 ntBASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.05■□□□□ 0.8
RPS4Y2Q8TD47 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RPS4Y2Q8TD47 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RPS4Y2Q8TD47 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4Y2Q8TD47 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RPS4Y2Q8TD47 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
RPS4Y2Q8TD47 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.03■□□□□ 0.8
RPS4Y2Q8TD47 C1orf229-201ENST00000623686 2258 ntBASIC20.02■□□□□ 0.8
RPS4Y2Q8TD47 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4Y2Q8TD47 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RPS4Y2Q8TD47 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4Y2Q8TD47 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4Y2Q8TD47 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RPS4Y2Q8TD47 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4Y2Q8TD47 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RPS4Y2Q8TD47 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.02■□□□□ 0.8
RPS4Y2Q8TD47 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RPS4Y2Q8TD47 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPS4Y2Q8TD47 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RPS4Y2Q8TD47 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 EP400NL-214ENST00000641289 2402 ntBASIC20.01■□□□□ 0.79
RPS4Y2Q8TD47 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS4Y2Q8TD47 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RPS4Y2Q8TD47 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPS4Y2Q8TD47 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPS4Y2Q8TD47 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RPS4Y2Q8TD47 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPS4Y2Q8TD47 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 AL592295.1-201ENST00000400984 884 ntBASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPS4Y2Q8TD47 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RPS4Y2Q8TD47 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y2Q8TD47 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y2Q8TD47 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y2Q8TD47 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y2Q8TD47 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y2Q8TD47 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y2Q8TD47 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y2Q8TD47 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPS4Y2Q8TD47 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms