Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SMARCC2Q8TAQ2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC2Q8TAQ2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC2Q8TAQ2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.87■■□□□ 1.89
SMARCC2Q8TAQ2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC2Q8TAQ2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
SMARCC2Q8TAQ2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.87■■□□□ 1.89
SMARCC2Q8TAQ2 KRT125P-201ENST00000546827 989 ntBASIC26.87■■□□□ 1.89
SMARCC2Q8TAQ2 AC137630.3-201ENST00000607245 391 ntBASIC26.87■■□□□ 1.89
SMARCC2Q8TAQ2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SMARCC2Q8TAQ2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SMARCC2Q8TAQ2 GUSBP5-201ENST00000418136 578 ntBASIC26.85■■□□□ 1.89
SMARCC2Q8TAQ2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.85■■□□□ 1.89
SMARCC2Q8TAQ2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SMARCC2Q8TAQ2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.84■■□□□ 1.89
SMARCC2Q8TAQ2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
SMARCC2Q8TAQ2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.84■■□□□ 1.89
SMARCC2Q8TAQ2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC2Q8TAQ2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SMARCC2Q8TAQ2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
SMARCC2Q8TAQ2 AL161729.1-201ENST00000604104 1402 ntBASIC26.83■■□□□ 1.89
SMARCC2Q8TAQ2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.83■■□□□ 1.89
SMARCC2Q8TAQ2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.83■■□□□ 1.89
SMARCC2Q8TAQ2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC2Q8TAQ2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
SMARCC2Q8TAQ2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC2Q8TAQ2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC2Q8TAQ2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SMARCC2Q8TAQ2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
SMARCC2Q8TAQ2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.83■■□□□ 1.88
SMARCC2Q8TAQ2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.82■■□□□ 1.88
SMARCC2Q8TAQ2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.82■■□□□ 1.88
SMARCC2Q8TAQ2 MIR4787-201ENST00000607364 84 ntBASIC26.82■■□□□ 1.88
SMARCC2Q8TAQ2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SMARCC2Q8TAQ2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SMARCC2Q8TAQ2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SMARCC2Q8TAQ2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC2Q8TAQ2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC2Q8TAQ2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.81■■□□□ 1.88
SMARCC2Q8TAQ2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.81■■□□□ 1.88
SMARCC2Q8TAQ2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
SMARCC2Q8TAQ2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC2Q8TAQ2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SMARCC2Q8TAQ2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
SMARCC2Q8TAQ2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
SMARCC2Q8TAQ2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.8■■□□□ 1.88
SMARCC2Q8TAQ2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.8■■□□□ 1.88
SMARCC2Q8TAQ2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.8■■□□□ 1.88
SMARCC2Q8TAQ2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMARCC2Q8TAQ2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SMARCC2Q8TAQ2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 AC021242.3-201ENST00000607598 1377 ntBASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 AC131274.2-201ENST00000580697 1507 ntBASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SMARCC2Q8TAQ2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SMARCC2Q8TAQ2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SMARCC2Q8TAQ2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SMARCC2Q8TAQ2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.77■■□□□ 1.88
SMARCC2Q8TAQ2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.77■■□□□ 1.88
SMARCC2Q8TAQ2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.77■■□□□ 1.88
SMARCC2Q8TAQ2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SMARCC2Q8TAQ2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SMARCC2Q8TAQ2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
SMARCC2Q8TAQ2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SMARCC2Q8TAQ2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
SMARCC2Q8TAQ2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms