Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SRFBP1Q8NEF9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.79■■□□□ 1.08
SRFBP1Q8NEF9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRFBP1Q8NEF9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRFBP1Q8NEF9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SRFBP1Q8NEF9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SRFBP1Q8NEF9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 SNX5-217ENST00000606557 1087 ntBASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.78■■□□□ 1.08
SRFBP1Q8NEF9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRFBP1Q8NEF9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRFBP1Q8NEF9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRFBP1Q8NEF9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.77■■□□□ 1.08
SRFBP1Q8NEF9 ALDH1A3-203ENST00000557963 1670 ntBASIC21.77■■□□□ 1.08
SRFBP1Q8NEF9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.77■■□□□ 1.08
SRFBP1Q8NEF9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRFBP1Q8NEF9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRFBP1Q8NEF9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
SRFBP1Q8NEF9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
SRFBP1Q8NEF9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
SRFBP1Q8NEF9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 AC239859.2-201ENST00000444165 318 ntBASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 MIR4787-201ENST00000607364 84 ntBASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRFBP1Q8NEF9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRFBP1Q8NEF9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRFBP1Q8NEF9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRFBP1Q8NEF9 AC092028.1-203ENST00000608262 953 ntBASIC21.75■■□□□ 1.07
SRFBP1Q8NEF9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRFBP1Q8NEF9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRFBP1Q8NEF9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 MIR6722-201ENST00000617286 78 ntBASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SRFBP1Q8NEF9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SRFBP1Q8NEF9 ABCB10P4-201ENST00000566803 2184 ntBASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 AL035685.1-201ENST00000636663 812 ntBASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.72■■□□□ 1.07
SRFBP1Q8NEF9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRFBP1Q8NEF9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRFBP1Q8NEF9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.71■■□□□ 1.07
SRFBP1Q8NEF9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRFBP1Q8NEF9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.71■■□□□ 1.07
SRFBP1Q8NEF9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.71■■□□□ 1.07
SRFBP1Q8NEF9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRFBP1Q8NEF9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
SRFBP1Q8NEF9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.7■■□□□ 1.06
SRFBP1Q8NEF9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms