Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PHC3Q8NDX5 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
PHC3Q8NDX5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PHC3Q8NDX5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
PHC3Q8NDX5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PHC3Q8NDX5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.76■■□□□ 1.23
PHC3Q8NDX5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.76■■□□□ 1.23
PHC3Q8NDX5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PHC3Q8NDX5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
PHC3Q8NDX5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PHC3Q8NDX5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.76■■□□□ 1.23
PHC3Q8NDX5 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
PHC3Q8NDX5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PHC3Q8NDX5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PHC3Q8NDX5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.75■■□□□ 1.23
PHC3Q8NDX5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.75■■□□□ 1.23
PHC3Q8NDX5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
PHC3Q8NDX5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.75■■□□□ 1.23
PHC3Q8NDX5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PHC3Q8NDX5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
PHC3Q8NDX5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PHC3Q8NDX5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PHC3Q8NDX5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PHC3Q8NDX5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PHC3Q8NDX5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PHC3Q8NDX5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PHC3Q8NDX5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PHC3Q8NDX5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PHC3Q8NDX5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.73■■□□□ 1.23
PHC3Q8NDX5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PHC3Q8NDX5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PHC3Q8NDX5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
PHC3Q8NDX5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PHC3Q8NDX5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.72■■□□□ 1.23
PHC3Q8NDX5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.72■■□□□ 1.23
PHC3Q8NDX5 AC239859.2-201ENST00000444165 318 ntBASIC22.72■■□□□ 1.23
PHC3Q8NDX5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
PHC3Q8NDX5 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
PHC3Q8NDX5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PHC3Q8NDX5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PHC3Q8NDX5 AP003733.4-201ENST00000623785 1697 ntBASIC22.71■■□□□ 1.23
PHC3Q8NDX5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
PHC3Q8NDX5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PHC3Q8NDX5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PHC3Q8NDX5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PHC3Q8NDX5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.71■■□□□ 1.23
PHC3Q8NDX5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PHC3Q8NDX5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
PHC3Q8NDX5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.7■■□□□ 1.23
PHC3Q8NDX5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.7■■□□□ 1.22
PHC3Q8NDX5 AC137630.3-201ENST00000607245 391 ntBASIC22.7■■□□□ 1.22
PHC3Q8NDX5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PHC3Q8NDX5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.69■■□□□ 1.22
PHC3Q8NDX5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.68■■□□□ 1.22
PHC3Q8NDX5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PHC3Q8NDX5 AF131216.4-201ENST00000638924 1588 ntBASIC22.68■■□□□ 1.22
PHC3Q8NDX5 AL024507.2-201ENST00000606070 2574 ntBASIC22.68■■□□□ 1.22
PHC3Q8NDX5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PHC3Q8NDX5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PHC3Q8NDX5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
PHC3Q8NDX5 BX664725.1-201ENST00000438252 379 ntBASIC22.68■■□□□ 1.22
PHC3Q8NDX5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.68■■□□□ 1.22
PHC3Q8NDX5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.68■■□□□ 1.22
PHC3Q8NDX5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PHC3Q8NDX5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PHC3Q8NDX5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.66■■□□□ 1.22
PHC3Q8NDX5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PHC3Q8NDX5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PHC3Q8NDX5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.66■■□□□ 1.22
PHC3Q8NDX5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.66■■□□□ 1.22
PHC3Q8NDX5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PHC3Q8NDX5 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms