Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ZNF439Q8NDP4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF439Q8NDP4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ZNF439Q8NDP4 MIR4508-201ENST00000584178 70 ntBASIC18.87■□□□□ 0.61
ZNF439Q8NDP4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF439Q8NDP4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.87■□□□□ 0.61
ZNF439Q8NDP4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF439Q8NDP4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF439Q8NDP4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF439Q8NDP4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF439Q8NDP4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.86■□□□□ 0.61
ZNF439Q8NDP4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF439Q8NDP4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF439Q8NDP4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF439Q8NDP4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.85■□□□□ 0.61
ZNF439Q8NDP4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 AC103834.1-201ENST00000520383 144 ntBASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 THA1P-201ENST00000590384 1145 ntBASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF439Q8NDP4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF439Q8NDP4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF439Q8NDP4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.83■□□□□ 0.61
ZNF439Q8NDP4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ZNF439Q8NDP4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.83■□□□□ 0.6
ZNF439Q8NDP4 MIR4281-201ENST00000580852 62 ntBASIC18.83■□□□□ 0.6
ZNF439Q8NDP4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF439Q8NDP4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZNF439Q8NDP4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZNF439Q8NDP4 AC131274.2-201ENST00000580697 1507 ntBASIC18.83■□□□□ 0.6
ZNF439Q8NDP4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 AL022069.1-201ENST00000568025 1636 ntBASIC18.82■□□□□ 0.6
ZNF439Q8NDP4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 AF131216.4-201ENST00000638924 1588 ntBASIC18.81■□□□□ 0.6
ZNF439Q8NDP4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF439Q8NDP4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF439Q8NDP4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF439Q8NDP4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.8■□□□□ 0.6
ZNF439Q8NDP4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF439Q8NDP4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF439Q8NDP4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF439Q8NDP4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF439Q8NDP4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.8■□□□□ 0.6
ZNF439Q8NDP4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ZNF439Q8NDP4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms