Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PAF1Q8N7H5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 GUSBP5-201ENST00000418136 578 ntBASIC23.35■■□□□ 1.33
PAF1Q8N7H5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PAF1Q8N7H5 HLA-L-211ENST00000482052 1765 ntBASIC23.35■■□□□ 1.33
PAF1Q8N7H5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 MTDHP2-201ENST00000601468 714 ntBASIC23.34■■□□□ 1.33
PAF1Q8N7H5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.34■■□□□ 1.33
PAF1Q8N7H5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.33■■□□□ 1.33
PAF1Q8N7H5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PAF1Q8N7H5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PAF1Q8N7H5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PAF1Q8N7H5 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.33■■□□□ 1.33
PAF1Q8N7H5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PAF1Q8N7H5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.33■■□□□ 1.33
PAF1Q8N7H5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.33■■□□□ 1.33
PAF1Q8N7H5 AC092028.1-203ENST00000608262 953 ntBASIC23.33■■□□□ 1.33
PAF1Q8N7H5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PAF1Q8N7H5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PAF1Q8N7H5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
PAF1Q8N7H5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PAF1Q8N7H5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PAF1Q8N7H5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
PAF1Q8N7H5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PAF1Q8N7H5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PAF1Q8N7H5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PAF1Q8N7H5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PAF1Q8N7H5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.32■■□□□ 1.32
PAF1Q8N7H5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PAF1Q8N7H5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PAF1Q8N7H5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PAF1Q8N7H5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PAF1Q8N7H5 KRT16P3-201ENST00000439127 1283 ntBASIC23.31■■□□□ 1.32
PAF1Q8N7H5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.31■■□□□ 1.32
PAF1Q8N7H5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PAF1Q8N7H5 AL022069.1-201ENST00000568025 1636 ntBASIC23.3■■□□□ 1.32
PAF1Q8N7H5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.3■■□□□ 1.32
PAF1Q8N7H5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PAF1Q8N7H5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PAF1Q8N7H5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.29■■□□□ 1.32
PAF1Q8N7H5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PAF1Q8N7H5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PAF1Q8N7H5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.29■■□□□ 1.32
PAF1Q8N7H5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.29■■□□□ 1.32
PAF1Q8N7H5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PAF1Q8N7H5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PAF1Q8N7H5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.28■■□□□ 1.32
PAF1Q8N7H5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
PAF1Q8N7H5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PAF1Q8N7H5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PAF1Q8N7H5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.28■■□□□ 1.32
PAF1Q8N7H5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PAF1Q8N7H5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.28■■□□□ 1.32
PAF1Q8N7H5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PAF1Q8N7H5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PAF1Q8N7H5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 AC010997.5-201ENST00000609182 354 ntBASIC23.27■■□□□ 1.32
PAF1Q8N7H5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms