Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RAB42Q8N4Z0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.26■■□□□ 1.15
RAB42Q8N4Z0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RAB42Q8N4Z0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
RAB42Q8N4Z0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RAB42Q8N4Z0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.25■■□□□ 1.15
RAB42Q8N4Z0 MIR6722-201ENST00000617286 78 ntBASIC22.25■■□□□ 1.15
RAB42Q8N4Z0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.25■■□□□ 1.15
RAB42Q8N4Z0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.25■■□□□ 1.15
RAB42Q8N4Z0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RAB42Q8N4Z0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAB42Q8N4Z0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAB42Q8N4Z0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAB42Q8N4Z0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.24■■□□□ 1.15
RAB42Q8N4Z0 AC010997.5-201ENST00000609182 354 ntBASIC22.24■■□□□ 1.15
RAB42Q8N4Z0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RAB42Q8N4Z0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RAB42Q8N4Z0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.24■■□□□ 1.15
RAB42Q8N4Z0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAB42Q8N4Z0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.22■■□□□ 1.15
RAB42Q8N4Z0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RAB42Q8N4Z0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAB42Q8N4Z0 KRT16P3-201ENST00000439127 1283 ntBASIC22.21■■□□□ 1.15
RAB42Q8N4Z0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAB42Q8N4Z0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.2■■□□□ 1.15
RAB42Q8N4Z0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RAB42Q8N4Z0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.19■■□□□ 1.14
RAB42Q8N4Z0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 ALDH1A3-203ENST00000557963 1670 ntBASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 UNC93B8-201ENST00000511903 705 ntBASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
RAB42Q8N4Z0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 AC005703.6-201ENST00000623265 1329 ntBASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAB42Q8N4Z0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms