Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC105Q8IYK2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.52■■□□□ 1.52
CCDC105Q8IYK2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.52■■□□□ 1.52
CCDC105Q8IYK2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC105Q8IYK2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CCDC105Q8IYK2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC105Q8IYK2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC105Q8IYK2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC105Q8IYK2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC105Q8IYK2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CCDC105Q8IYK2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC105Q8IYK2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC105Q8IYK2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC105Q8IYK2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC105Q8IYK2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 ZNRF2P3-201ENST00000424200 374 ntBASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 AC010997.5-201ENST00000609182 354 ntBASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC105Q8IYK2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 MIR6724-1-201ENST00000616420 92 ntBASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 MIR6724-2-201ENST00000616483 92 ntBASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 MIR6724-4-201ENST00000617390 92 ntBASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 MIR6724-3-201ENST00000622482 92 ntBASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
CCDC105Q8IYK2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 AL356740.2-201ENST00000601559 647 ntBASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 MIR4466-201ENST00000606121 54 ntBASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC105Q8IYK2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 AC104564.3-201ENST00000582367 638 ntBASIC24.47■■□□□ 1.51
CCDC105Q8IYK2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC105Q8IYK2 MIR4281-201ENST00000580852 62 ntBASIC24.46■■□□□ 1.51
CCDC105Q8IYK2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.46■■□□□ 1.51
CCDC105Q8IYK2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC105Q8IYK2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC105Q8IYK2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.45■■□□□ 1.51
CCDC105Q8IYK2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.45■■□□□ 1.51
CCDC105Q8IYK2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 AC026271.2-201ENST00000428091 497 ntBASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 AC141586.4-201ENST00000624558 1573 ntBASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC105Q8IYK2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC105Q8IYK2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC105Q8IYK2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC105Q8IYK2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC105Q8IYK2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC105Q8IYK2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 MTDHP2-201ENST00000601468 714 ntBASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.43■■□□□ 1.5
CCDC105Q8IYK2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC105Q8IYK2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC105Q8IYK2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC105Q8IYK2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms