Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC146Q8IYE0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC146Q8IYE0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.41■■■□□ 2.46
CCDC146Q8IYE0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.41■■■□□ 2.46
CCDC146Q8IYE0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC146Q8IYE0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC146Q8IYE0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.41■■■□□ 2.46
CCDC146Q8IYE0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC146Q8IYE0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC30.4■■■□□ 2.46
CCDC146Q8IYE0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
CCDC146Q8IYE0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
CCDC146Q8IYE0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
CCDC146Q8IYE0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CCDC146Q8IYE0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CCDC146Q8IYE0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC146Q8IYE0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC146Q8IYE0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
CCDC146Q8IYE0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC146Q8IYE0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.39■■■□□ 2.46
CCDC146Q8IYE0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.39■■■□□ 2.46
CCDC146Q8IYE0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.39■■■□□ 2.46
CCDC146Q8IYE0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.39■■■□□ 2.46
CCDC146Q8IYE0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC30.39■■■□□ 2.46
CCDC146Q8IYE0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC146Q8IYE0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC146Q8IYE0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC146Q8IYE0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC146Q8IYE0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC30.38■■■□□ 2.45
CCDC146Q8IYE0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CCDC146Q8IYE0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC30.37■■■□□ 2.45
CCDC146Q8IYE0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.37■■■□□ 2.45
CCDC146Q8IYE0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.37■■■□□ 2.45
CCDC146Q8IYE0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CCDC146Q8IYE0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30.37■■■□□ 2.45
CCDC146Q8IYE0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
CCDC146Q8IYE0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
CCDC146Q8IYE0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
CCDC146Q8IYE0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC146Q8IYE0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC146Q8IYE0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC146Q8IYE0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC146Q8IYE0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.36■■■□□ 2.45
CCDC146Q8IYE0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC146Q8IYE0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CCDC146Q8IYE0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CCDC146Q8IYE0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.35■■■□□ 2.45
CCDC146Q8IYE0 MTDHP2-201ENST00000601468 714 ntBASIC30.35■■■□□ 2.45
CCDC146Q8IYE0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.35■■■□□ 2.45
CCDC146Q8IYE0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.35■■■□□ 2.45
CCDC146Q8IYE0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 AC010997.5-201ENST00000609182 354 ntBASIC30.34■■■□□ 2.45
CCDC146Q8IYE0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC146Q8IYE0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC30.32■■■□□ 2.44
CCDC146Q8IYE0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC146Q8IYE0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC146Q8IYE0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
CCDC146Q8IYE0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC146Q8IYE0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC146Q8IYE0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC146Q8IYE0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC146Q8IYE0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC146Q8IYE0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC146Q8IYE0 AL161729.1-201ENST00000604104 1402 ntBASIC30.31■■■□□ 2.44
CCDC146Q8IYE0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
CCDC146Q8IYE0 KRT16P3-201ENST00000439127 1283 ntBASIC30.31■■■□□ 2.44
CCDC146Q8IYE0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.31■■■□□ 2.44
CCDC146Q8IYE0 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.31■■■□□ 2.44
CCDC146Q8IYE0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC146Q8IYE0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30.31■■■□□ 2.44
CCDC146Q8IYE0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 ALDH1A3-203ENST00000557963 1670 ntBASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 AL356441.2-201ENST00000443009 864 ntBASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC146Q8IYE0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms