Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
RSPH3Q86UC2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.27■■□□□ 1.64
RSPH3Q86UC2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RSPH3Q86UC2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.26■■□□□ 1.63
RSPH3Q86UC2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.26■■□□□ 1.63
RSPH3Q86UC2 ZNRF2P3-201ENST00000424200 374 ntBASIC25.26■■□□□ 1.63
RSPH3Q86UC2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
RSPH3Q86UC2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RSPH3Q86UC2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RSPH3Q86UC2 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.25■■□□□ 1.63
RSPH3Q86UC2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RSPH3Q86UC2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RSPH3Q86UC2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RSPH3Q86UC2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RSPH3Q86UC2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.24■■□□□ 1.63
RSPH3Q86UC2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
RSPH3Q86UC2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RSPH3Q86UC2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
RSPH3Q86UC2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
RSPH3Q86UC2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
RSPH3Q86UC2 AL161729.1-201ENST00000604104 1402 ntBASIC25.23■■□□□ 1.63
RSPH3Q86UC2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RSPH3Q86UC2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
RSPH3Q86UC2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.23■■□□□ 1.63
RSPH3Q86UC2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
RSPH3Q86UC2 AC009102.2-201ENST00000606772 1639 ntBASIC25.23■■□□□ 1.63
RSPH3Q86UC2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RSPH3Q86UC2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RSPH3Q86UC2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RSPH3Q86UC2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RSPH3Q86UC2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
RSPH3Q86UC2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RSPH3Q86UC2 AC099791.2-201ENST00000605725 427 ntBASIC25.22■■□□□ 1.63
RSPH3Q86UC2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RSPH3Q86UC2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RSPH3Q86UC2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RSPH3Q86UC2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RSPH3Q86UC2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RSPH3Q86UC2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
RSPH3Q86UC2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.21■■□□□ 1.63
RSPH3Q86UC2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.21■■□□□ 1.63
RSPH3Q86UC2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RSPH3Q86UC2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.63
RSPH3Q86UC2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RSPH3Q86UC2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.2■■□□□ 1.62
RSPH3Q86UC2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RSPH3Q86UC2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RSPH3Q86UC2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.2■■□□□ 1.62
RSPH3Q86UC2 AF213884.3-201ENST00000563833 479 ntBASIC25.2■■□□□ 1.62
RSPH3Q86UC2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.2■■□□□ 1.62
RSPH3Q86UC2 AL136967.2-201ENST00000623968 743 ntBASIC25.2■■□□□ 1.62
RSPH3Q86UC2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
RSPH3Q86UC2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
RSPH3Q86UC2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
RSPH3Q86UC2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.19■■□□□ 1.62
RSPH3Q86UC2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RSPH3Q86UC2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.19■■□□□ 1.62
RSPH3Q86UC2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RSPH3Q86UC2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.19■■□□□ 1.62
RSPH3Q86UC2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.19■■□□□ 1.62
RSPH3Q86UC2 AL138724.1-201ENST00000606771 1088 ntBASIC25.19■■□□□ 1.62
RSPH3Q86UC2 AC241377.3-202ENST00000626088 1088 ntBASIC25.19■■□□□ 1.62
RSPH3Q86UC2 AC241585.3-202ENST00000628937 1088 ntBASIC25.19■■□□□ 1.62
RSPH3Q86UC2 AC245100.8-202ENST00000629247 1058 ntBASIC25.19■■□□□ 1.62
RSPH3Q86UC2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
RSPH3Q86UC2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
RSPH3Q86UC2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
RSPH3Q86UC2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 SERBP1P1-201ENST00000396021 1160 ntBASIC25.18■■□□□ 1.62
RSPH3Q86UC2 MIR939-201ENST00000401314 82 ntBASIC25.18■■□□□ 1.62
RSPH3Q86UC2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 MIR4767-201ENST00000582827 78 ntBASIC25.18■■□□□ 1.62
RSPH3Q86UC2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
RSPH3Q86UC2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.17■■□□□ 1.62
RSPH3Q86UC2 AC091305.1-201ENST00000479476 895 ntBASIC25.17■■□□□ 1.62
RSPH3Q86UC2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 AP001330.3-201ENST00000520123 633 ntBASIC25.17■■□□□ 1.62
RSPH3Q86UC2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
RSPH3Q86UC2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.16■■□□□ 1.62
RSPH3Q86UC2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
RSPH3Q86UC2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RSPH3Q86UC2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RSPH3Q86UC2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms