Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.02■■□□□ 1.28
LYSMD3Q7Z3D4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.02■■□□□ 1.28
LYSMD3Q7Z3D4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.02■■□□□ 1.28
LYSMD3Q7Z3D4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LYSMD3Q7Z3D4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LYSMD3Q7Z3D4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LYSMD3Q7Z3D4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 TSPY9P-201ENST00000440215 945 ntBASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 TSPY11P-201ENST00000442607 1045 ntBASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 AC004812.2-201ENST00000611079 2094 ntBASIC23.01■■□□□ 1.27
LYSMD3Q7Z3D4 AL161729.1-201ENST00000604104 1402 ntBASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LYSMD3Q7Z3D4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LYSMD3Q7Z3D4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
LYSMD3Q7Z3D4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
LYSMD3Q7Z3D4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.98■■□□□ 1.27
LYSMD3Q7Z3D4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LYSMD3Q7Z3D4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.98■■□□□ 1.27
LYSMD3Q7Z3D4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
LYSMD3Q7Z3D4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.98■■□□□ 1.27
LYSMD3Q7Z3D4 UNC93B8-201ENST00000511903 705 ntBASIC22.98■■□□□ 1.27
LYSMD3Q7Z3D4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.98■■□□□ 1.27
LYSMD3Q7Z3D4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.98■■□□□ 1.27
LYSMD3Q7Z3D4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LYSMD3Q7Z3D4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.97■■□□□ 1.27
LYSMD3Q7Z3D4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LYSMD3Q7Z3D4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LYSMD3Q7Z3D4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LYSMD3Q7Z3D4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LYSMD3Q7Z3D4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.97■■□□□ 1.27
LYSMD3Q7Z3D4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.96■■□□□ 1.27
LYSMD3Q7Z3D4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LYSMD3Q7Z3D4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LYSMD3Q7Z3D4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LYSMD3Q7Z3D4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 MTDHP2-201ENST00000601468 714 ntBASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LYSMD3Q7Z3D4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD3Q7Z3D4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.93■■□□□ 1.26
LYSMD3Q7Z3D4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.93■■□□□ 1.26
LYSMD3Q7Z3D4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD3Q7Z3D4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
LYSMD3Q7Z3D4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 AC010997.5-201ENST00000609182 354 ntBASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
LYSMD3Q7Z3D4 ABCB10P4-201ENST00000566803 2184 ntBASIC22.91■■□□□ 1.26
LYSMD3Q7Z3D4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.91■■□□□ 1.26
LYSMD3Q7Z3D4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LYSMD3Q7Z3D4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
LYSMD3Q7Z3D4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.91■■□□□ 1.26
LYSMD3Q7Z3D4 MIR6722-201ENST00000617286 78 ntBASIC22.91■■□□□ 1.26
LYSMD3Q7Z3D4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms