Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF44Q7L0R7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF44Q7L0R7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF44Q7L0R7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF44Q7L0R7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF44Q7L0R7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF44Q7L0R7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.96■■□□□ 1.11
RNF44Q7L0R7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF44Q7L0R7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF44Q7L0R7 AC135731.1-201ENST00000569415 2548 ntBASIC21.96■■□□□ 1.11
RNF44Q7L0R7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF44Q7L0R7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF44Q7L0R7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF44Q7L0R7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF44Q7L0R7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF44Q7L0R7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF44Q7L0R7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF44Q7L0R7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF44Q7L0R7 AL139125.2-201ENST00000623134 1869 ntBASIC21.94■■□□□ 1.1
RNF44Q7L0R7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF44Q7L0R7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RNF44Q7L0R7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF44Q7L0R7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RNF44Q7L0R7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF44Q7L0R7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF44Q7L0R7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF44Q7L0R7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF44Q7L0R7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF44Q7L0R7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF44Q7L0R7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF44Q7L0R7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF44Q7L0R7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF44Q7L0R7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF44Q7L0R7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF44Q7L0R7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF44Q7L0R7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RNF44Q7L0R7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 AC141586.4-201ENST00000624558 1573 ntBASIC21.91■■□□□ 1.1
RNF44Q7L0R7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 AC131212.1-201ENST00000613771 668 ntBASIC21.91■■□□□ 1.1
RNF44Q7L0R7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF44Q7L0R7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF44Q7L0R7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RNF44Q7L0R7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF44Q7L0R7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF44Q7L0R7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF44Q7L0R7 AL117332.1-201ENST00000622628 974 ntBASIC21.9■■□□□ 1.1
RNF44Q7L0R7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF44Q7L0R7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF44Q7L0R7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.89■■□□□ 1.1
RNF44Q7L0R7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF44Q7L0R7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF44Q7L0R7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF44Q7L0R7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF44Q7L0R7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF44Q7L0R7 LINC00543-201ENST00000567234 1845 ntBASIC21.89■■□□□ 1.09
RNF44Q7L0R7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF44Q7L0R7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
RNF44Q7L0R7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 LINC01124-201ENST00000409786 2117 ntBASIC21.88■■□□□ 1.09
RNF44Q7L0R7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF44Q7L0R7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RNF44Q7L0R7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF44Q7L0R7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF44Q7L0R7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF44Q7L0R7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF44Q7L0R7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
RNF44Q7L0R7 MIR3621-201ENST00000580529 85 ntBASIC21.87■■□□□ 1.09
RNF44Q7L0R7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF44Q7L0R7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF44Q7L0R7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF44Q7L0R7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF44Q7L0R7 AC005703.6-201ENST00000623265 1329 ntBASIC21.86■■□□□ 1.09
RNF44Q7L0R7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF44Q7L0R7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF44Q7L0R7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF44Q7L0R7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms