Protein–RNA interactions for Protein: Q6ZSA7

LRRC55, Leucine-rich repeat-containing protein 55, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55Q6ZSA7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
LRRC55Q6ZSA7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.5■■□□□ 1.67
LRRC55Q6ZSA7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
LRRC55Q6ZSA7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.5■■□□□ 1.67
LRRC55Q6ZSA7 AL117332.1-201ENST00000622628 974 ntBASIC25.5■■□□□ 1.67
LRRC55Q6ZSA7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC25.49■■□□□ 1.67
LRRC55Q6ZSA7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
LRRC55Q6ZSA7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
LRRC55Q6ZSA7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.49■■□□□ 1.67
LRRC55Q6ZSA7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.49■■□□□ 1.67
LRRC55Q6ZSA7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.49■■□□□ 1.67
LRRC55Q6ZSA7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.49■■□□□ 1.67
LRRC55Q6ZSA7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.49■■□□□ 1.67
LRRC55Q6ZSA7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
LRRC55Q6ZSA7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
LRRC55Q6ZSA7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
LRRC55Q6ZSA7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.48■■□□□ 1.67
LRRC55Q6ZSA7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.48■■□□□ 1.67
LRRC55Q6ZSA7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
LRRC55Q6ZSA7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
LRRC55Q6ZSA7 AF131216.4-201ENST00000638924 1588 ntBASIC25.48■■□□□ 1.67
LRRC55Q6ZSA7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.47■■□□□ 1.67
LRRC55Q6ZSA7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
LRRC55Q6ZSA7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
LRRC55Q6ZSA7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.47■■□□□ 1.67
LRRC55Q6ZSA7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.47■■□□□ 1.67
LRRC55Q6ZSA7 MIR638-201ENST00000385237 100 ntBASIC25.47■■□□□ 1.67
LRRC55Q6ZSA7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
LRRC55Q6ZSA7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.47■■□□□ 1.67
LRRC55Q6ZSA7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.47■■□□□ 1.67
LRRC55Q6ZSA7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 MIR3621-201ENST00000580529 85 ntBASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 MIR6724-1-201ENST00000616420 92 ntBASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 MIR6724-2-201ENST00000616483 92 ntBASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 MIR6724-4-201ENST00000617390 92 ntBASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 MIR6724-3-201ENST00000622482 92 ntBASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
LRRC55Q6ZSA7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.45■■□□□ 1.67
LRRC55Q6ZSA7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.45■■□□□ 1.66
LRRC55Q6ZSA7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
LRRC55Q6ZSA7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
LRRC55Q6ZSA7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.45■■□□□ 1.66
LRRC55Q6ZSA7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
LRRC55Q6ZSA7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
LRRC55Q6ZSA7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.45■■□□□ 1.66
LRRC55Q6ZSA7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
LRRC55Q6ZSA7 ABCB10P4-201ENST00000566803 2184 ntBASIC25.44■■□□□ 1.66
LRRC55Q6ZSA7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.44■■□□□ 1.66
LRRC55Q6ZSA7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
LRRC55Q6ZSA7 MTDHP2-201ENST00000601468 714 ntBASIC25.44■■□□□ 1.66
LRRC55Q6ZSA7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
LRRC55Q6ZSA7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
LRRC55Q6ZSA7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.43■■□□□ 1.66
LRRC55Q6ZSA7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 AL136116.3-201ENST00000402907 1138 ntBASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 AL139246.5-201ENST00000606645 996 ntBASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
LRRC55Q6ZSA7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.41■■□□□ 1.66
LRRC55Q6ZSA7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
LRRC55Q6ZSA7 MIR935-201ENST00000401179 91 ntBASIC25.41■■□□□ 1.66
LRRC55Q6ZSA7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.41■■□□□ 1.66
LRRC55Q6ZSA7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.41■■□□□ 1.66
LRRC55Q6ZSA7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.41■■□□□ 1.66
LRRC55Q6ZSA7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
LRRC55Q6ZSA7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.4■■□□□ 1.66
LRRC55Q6ZSA7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms