Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.33■■□□□ 1
RTL4Q6ZR62 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.33■■□□□ 1
RTL4Q6ZR62 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTL4Q6ZR62 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTL4Q6ZR62 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RTL4Q6ZR62 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.32■■□□□ 1
RTL4Q6ZR62 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL4Q6ZR62 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.32■■□□□ 1
RTL4Q6ZR62 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.32■■□□□ 1
RTL4Q6ZR62 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RTL4Q6ZR62 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RTL4Q6ZR62 AC010997.5-201ENST00000609182 354 ntBASIC21.32■■□□□ 1
RTL4Q6ZR62 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL4Q6ZR62 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.32■■□□□ 1
RTL4Q6ZR62 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.32■■□□□ 1
RTL4Q6ZR62 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RTL4Q6ZR62 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL4Q6ZR62 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RTL4Q6ZR62 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.31■■□□□ 1
RTL4Q6ZR62 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
RTL4Q6ZR62 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.31■■□□□ 1
RTL4Q6ZR62 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
RTL4Q6ZR62 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL4Q6ZR62 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.31■■□□□ 1
RTL4Q6ZR62 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RTL4Q6ZR62 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.3■■□□□ 1
RTL4Q6ZR62 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.3■■□□□ 1
RTL4Q6ZR62 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 LINC00543-201ENST00000567234 1845 ntBASIC21.3■■□□□ 1
RTL4Q6ZR62 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.3■■□□□ 1
RTL4Q6ZR62 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.3■■□□□ 1
RTL4Q6ZR62 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.3■■□□□ 1
RTL4Q6ZR62 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.3■■□□□ 1
RTL4Q6ZR62 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RTL4Q6ZR62 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RTL4Q6ZR62 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.29■■□□□ 1
RTL4Q6ZR62 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.29■■□□□ 1
RTL4Q6ZR62 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL4Q6ZR62 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RTL4Q6ZR62 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL4Q6ZR62 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.29■■□□□ 1
RTL4Q6ZR62 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.29■■□□□ 1
RTL4Q6ZR62 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.29■■□□□ 1
RTL4Q6ZR62 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RTL4Q6ZR62 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RTL4Q6ZR62 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.28■■□□□ 1
RTL4Q6ZR62 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.28■■□□□ 1
RTL4Q6ZR62 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.28■■□□□ 1
RTL4Q6ZR62 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.28■■□□□ 1
RTL4Q6ZR62 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTL4Q6ZR62 AC141586.4-201ENST00000624558 1573 ntBASIC21.27■■□□□ 1
RTL4Q6ZR62 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
RTL4Q6ZR62 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RTL4Q6ZR62 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.27■□□□□ 0.99
RTL4Q6ZR62 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RTL4Q6ZR62 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RTL4Q6ZR62 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 SNX5-217ENST00000606557 1087 ntBASIC21.26■□□□□ 0.99
RTL4Q6ZR62 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.26■□□□□ 0.99
RTL4Q6ZR62 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RTL4Q6ZR62 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.25■□□□□ 0.99
RTL4Q6ZR62 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL4Q6ZR62 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL4Q6ZR62 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RTL4Q6ZR62 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RTL4Q6ZR62 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.25■□□□□ 0.99
RTL4Q6ZR62 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RTL4Q6ZR62 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RTL4Q6ZR62 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL4Q6ZR62 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.24■□□□□ 0.99
RTL4Q6ZR62 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RTL4Q6ZR62 MIR6724-1-201ENST00000616420 92 ntBASIC21.24■□□□□ 0.99
RTL4Q6ZR62 MIR6724-2-201ENST00000616483 92 ntBASIC21.24■□□□□ 0.99
RTL4Q6ZR62 MIR6724-4-201ENST00000617390 92 ntBASIC21.24■□□□□ 0.99
RTL4Q6ZR62 MIR6724-3-201ENST00000622482 92 ntBASIC21.24■□□□□ 0.99
RTL4Q6ZR62 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RTL4Q6ZR62 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
RTL4Q6ZR62 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.24■□□□□ 0.99
RTL4Q6ZR62 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.24■□□□□ 0.99
RTL4Q6ZR62 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms