Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 AC103834.1-201ENST00000520383 144 ntBASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FAM53AQ6NSI3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.93■□□□□ 0.62
FAM53AQ6NSI3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 AC131274.2-201ENST00000580697 1507 ntBASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
FAM53AQ6NSI3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 AC011551.1-201ENST00000614101 683 ntBASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.91■□□□□ 0.62
FAM53AQ6NSI3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
FAM53AQ6NSI3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM53AQ6NSI3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
FAM53AQ6NSI3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FAM53AQ6NSI3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM53AQ6NSI3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FAM53AQ6NSI3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
FAM53AQ6NSI3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FAM53AQ6NSI3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.89■□□□□ 0.62
FAM53AQ6NSI3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FAM53AQ6NSI3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FAM53AQ6NSI3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
FAM53AQ6NSI3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM53AQ6NSI3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FAM53AQ6NSI3 AC022616.5-201ENST00000518796 181 ntBASIC18.89■□□□□ 0.61
FAM53AQ6NSI3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FAM53AQ6NSI3 AC074183.2-201ENST00000623112 922 ntBASIC18.89■□□□□ 0.61
FAM53AQ6NSI3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
FAM53AQ6NSI3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.89■□□□□ 0.61
FAM53AQ6NSI3 AF131216.4-201ENST00000638924 1588 ntBASIC18.89■□□□□ 0.61
FAM53AQ6NSI3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 MIR4281-201ENST00000580852 62 ntBASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FAM53AQ6NSI3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.87■□□□□ 0.61
FAM53AQ6NSI3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM53AQ6NSI3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.86■□□□□ 0.61
FAM53AQ6NSI3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM53AQ6NSI3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM53AQ6NSI3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
FAM53AQ6NSI3 THA1P-201ENST00000590384 1145 ntBASIC18.86■□□□□ 0.61
FAM53AQ6NSI3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FAM53AQ6NSI3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
FAM53AQ6NSI3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FAM53AQ6NSI3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.85■□□□□ 0.61
FAM53AQ6NSI3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms