Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 AC004812.2-201ENST00000611079 2094 ntBASIC26.03■■□□□ 1.76
PPP4R3AQ6IN85 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R3AQ6IN85 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
PPP4R3AQ6IN85 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R3AQ6IN85 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R3AQ6IN85 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PPP4R3AQ6IN85 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PPP4R3AQ6IN85 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R3AQ6IN85 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R3AQ6IN85 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.02■■□□□ 1.76
PPP4R3AQ6IN85 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.02■■□□□ 1.76
PPP4R3AQ6IN85 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PPP4R3AQ6IN85 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R3AQ6IN85 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
PPP4R3AQ6IN85 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R3AQ6IN85 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R3AQ6IN85 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R3AQ6IN85 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R3AQ6IN85 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.01■■□□□ 1.75
PPP4R3AQ6IN85 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
PPP4R3AQ6IN85 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R3AQ6IN85 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R3AQ6IN85 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26■■□□□ 1.75
PPP4R3AQ6IN85 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.99■■□□□ 1.75
PPP4R3AQ6IN85 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PPP4R3AQ6IN85 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.99■■□□□ 1.75
PPP4R3AQ6IN85 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.99■■□□□ 1.75
PPP4R3AQ6IN85 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PPP4R3AQ6IN85 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 TSPY9P-201ENST00000440215 945 ntBASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 TSPY11P-201ENST00000442607 1045 ntBASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.98■■□□□ 1.75
PPP4R3AQ6IN85 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 AC093323.1-202ENST00000635031 2045 ntBASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 MTDHP2-201ENST00000601468 714 ntBASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 AC010997.5-201ENST00000609182 354 ntBASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PPP4R3AQ6IN85 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PPP4R3AQ6IN85 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PPP4R3AQ6IN85 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.96■■□□□ 1.75
PPP4R3AQ6IN85 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.96■■□□□ 1.75
PPP4R3AQ6IN85 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
PPP4R3AQ6IN85 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.96■■□□□ 1.75
PPP4R3AQ6IN85 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PPP4R3AQ6IN85 ALDH1A3-203ENST00000557963 1670 ntBASIC25.96■■□□□ 1.75
PPP4R3AQ6IN85 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.96■■□□□ 1.75
PPP4R3AQ6IN85 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.95■■□□□ 1.75
PPP4R3AQ6IN85 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.95■■□□□ 1.74
PPP4R3AQ6IN85 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PPP4R3AQ6IN85 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
PPP4R3AQ6IN85 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.94■■□□□ 1.74
PPP4R3AQ6IN85 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PPP4R3AQ6IN85 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PPP4R3AQ6IN85 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PPP4R3AQ6IN85 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PPP4R3AQ6IN85 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.94■■□□□ 1.74
PPP4R3AQ6IN85 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.94■■□□□ 1.74
PPP4R3AQ6IN85 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
PPP4R3AQ6IN85 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PPP4R3AQ6IN85 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PPP4R3AQ6IN85 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PPP4R3AQ6IN85 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.93■■□□□ 1.74
PPP4R3AQ6IN85 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.93■■□□□ 1.74
PPP4R3AQ6IN85 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.93■■□□□ 1.74
PPP4R3AQ6IN85 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PPP4R3AQ6IN85 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PPP4R3AQ6IN85 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.92■■□□□ 1.74
PPP4R3AQ6IN85 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.92■■□□□ 1.74
PPP4R3AQ6IN85 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms