Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC38.17■■■■□ 3.7
SNAPC4Q5SXM2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC38.17■■■■□ 3.7
SNAPC4Q5SXM2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
SNAPC4Q5SXM2 AC241377.3-202ENST00000626088 1088 ntBASIC38.16■■■■□ 3.7
SNAPC4Q5SXM2 AC241585.3-202ENST00000628937 1088 ntBASIC38.16■■■■□ 3.7
SNAPC4Q5SXM2 AC245100.8-202ENST00000629247 1058 ntBASIC38.16■■■■□ 3.7
SNAPC4Q5SXM2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC38.16■■■■□ 3.7
SNAPC4Q5SXM2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC38.15■■■■□ 3.7
SNAPC4Q5SXM2 AC123595.1-201ENST00000440769 1046 ntBASIC38.15■■■■□ 3.7
SNAPC4Q5SXM2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC38.15■■■■□ 3.7
SNAPC4Q5SXM2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC38.15■■■■□ 3.7
SNAPC4Q5SXM2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC38.15■■■■□ 3.7
SNAPC4Q5SXM2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC38.15■■■■□ 3.7
SNAPC4Q5SXM2 MIR3181-201ENST00000578512 73 ntBASIC38.15■■■■□ 3.7
SNAPC4Q5SXM2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
SNAPC4Q5SXM2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC38.14■■■■□ 3.7
SNAPC4Q5SXM2 TSPY26P-201ENST00000476365 1326 ntBASIC38.14■■■■□ 3.7
SNAPC4Q5SXM2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
SNAPC4Q5SXM2 AC096887.2-201ENST00000623443 1957 ntBASIC38.13■■■■□ 3.69
SNAPC4Q5SXM2 NME4-202ENST00000382940 766 ntTSL 3 BASIC38.13■■■■□ 3.69
SNAPC4Q5SXM2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC38.13■■■■□ 3.69
SNAPC4Q5SXM2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC38.13■■■■□ 3.69
SNAPC4Q5SXM2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
SNAPC4Q5SXM2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
SNAPC4Q5SXM2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
SNAPC4Q5SXM2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
SNAPC4Q5SXM2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC38.11■■■■□ 3.69
SNAPC4Q5SXM2 AC009086.3-201ENST00000623486 1008 ntBASIC38.11■■■■□ 3.69
SNAPC4Q5SXM2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC38.11■■■■□ 3.69
SNAPC4Q5SXM2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
SNAPC4Q5SXM2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC38.11■■■■□ 3.69
SNAPC4Q5SXM2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
SNAPC4Q5SXM2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC38.11■■■■□ 3.69
SNAPC4Q5SXM2 CCDC92B-201ENST00000575506 885 ntBASIC38.1■■■■□ 3.69
SNAPC4Q5SXM2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC38.1■■■■□ 3.69
SNAPC4Q5SXM2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC38.1■■■■□ 3.69
SNAPC4Q5SXM2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
SNAPC4Q5SXM2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC38.09■■■■□ 3.69
SNAPC4Q5SXM2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
SNAPC4Q5SXM2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC38.09■■■■□ 3.69
SNAPC4Q5SXM2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC38.09■■■■□ 3.69
SNAPC4Q5SXM2 MIR6084-201ENST00000622012 110 ntBASIC38.09■■■■□ 3.69
SNAPC4Q5SXM2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC38.08■■■■□ 3.69
SNAPC4Q5SXM2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC38.08■■■■□ 3.69
SNAPC4Q5SXM2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC38.08■■■■□ 3.69
SNAPC4Q5SXM2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC38.08■■■■□ 3.69
SNAPC4Q5SXM2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
SNAPC4Q5SXM2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
SNAPC4Q5SXM2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC38.08■■■■□ 3.69
SNAPC4Q5SXM2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC38.08■■■■□ 3.69
SNAPC4Q5SXM2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC38.08■■■■□ 3.69
SNAPC4Q5SXM2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
SNAPC4Q5SXM2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
SNAPC4Q5SXM2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC38.07■■■■□ 3.68
SNAPC4Q5SXM2 AC012414.1-201ENST00000556676 535 ntBASIC38.07■■■■□ 3.68
SNAPC4Q5SXM2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
SNAPC4Q5SXM2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC38.07■■■■□ 3.68
SNAPC4Q5SXM2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC38.06■■■■□ 3.68
SNAPC4Q5SXM2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC38.06■■■■□ 3.68
SNAPC4Q5SXM2 AL358852.1-201ENST00000623174 1268 ntBASIC38.06■■■■□ 3.68
SNAPC4Q5SXM2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
SNAPC4Q5SXM2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
SNAPC4Q5SXM2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
SNAPC4Q5SXM2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC38.05■■■■□ 3.68
SNAPC4Q5SXM2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
SNAPC4Q5SXM2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 AC126544.1-201ENST00000580842 1059 ntBASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 AC097639.1-201ENST00000565519 1891 ntBASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC38.04■■■■□ 3.68
SNAPC4Q5SXM2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
SNAPC4Q5SXM2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC38.03■■■■□ 3.68
SNAPC4Q5SXM2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
SNAPC4Q5SXM2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC38.02■■■■□ 3.68
SNAPC4Q5SXM2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC38.02■■■■□ 3.68
SNAPC4Q5SXM2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
SNAPC4Q5SXM2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC38.02■■■■□ 3.68
SNAPC4Q5SXM2 ABHD17AP1-201ENST00000358206 933 ntBASIC38.02■■■■□ 3.68
SNAPC4Q5SXM2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC38.02■■■■□ 3.68
SNAPC4Q5SXM2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC38.01■■■■□ 3.68
SNAPC4Q5SXM2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC38.01■■■■□ 3.68
SNAPC4Q5SXM2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.67
SNAPC4Q5SXM2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC38■■■■□ 3.67
SNAPC4Q5SXM2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC37.99■■■■□ 3.67
SNAPC4Q5SXM2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
SNAPC4Q5SXM2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC37.99■■■■□ 3.67
SNAPC4Q5SXM2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC37.99■■■■□ 3.67
SNAPC4Q5SXM2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
SNAPC4Q5SXM2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC37.99■■■■□ 3.67
SNAPC4Q5SXM2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC37.99■■■■□ 3.67
SNAPC4Q5SXM2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
SNAPC4Q5SXM2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC37.98■■■■□ 3.67
SNAPC4Q5SXM2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC37.98■■■■□ 3.67
SNAPC4Q5SXM2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
SNAPC4Q5SXM2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms