Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM60Q495X7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
TRIM60Q495X7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
TRIM60Q495X7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.42■■□□□ 1.66
TRIM60Q495X7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.42■■□□□ 1.66
TRIM60Q495X7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM60Q495X7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TRIM60Q495X7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM60Q495X7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM60Q495X7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
TRIM60Q495X7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
TRIM60Q495X7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.41■■□□□ 1.66
TRIM60Q495X7 DUX4L2-201ENST00000561772 1275 ntBASIC25.41■■□□□ 1.66
TRIM60Q495X7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.41■■□□□ 1.66
TRIM60Q495X7 DUX4L6-201ENST00000626483 1275 ntBASIC25.41■■□□□ 1.66
TRIM60Q495X7 DUX4L1-201ENST00000627662 1275 ntBASIC25.41■■□□□ 1.66
TRIM60Q495X7 DUX4L8-201ENST00000629013 1275 ntBASIC25.41■■□□□ 1.66
TRIM60Q495X7 DUX4L3-201ENST00000630187 1275 ntBASIC25.41■■□□□ 1.66
TRIM60Q495X7 DUX4L7-201ENST00000630678 1275 ntBASIC25.41■■□□□ 1.66
TRIM60Q495X7 DUX4L5-201ENST00000630834 1275 ntBASIC25.41■■□□□ 1.66
TRIM60Q495X7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRIM60Q495X7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM60Q495X7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.4■■□□□ 1.66
TRIM60Q495X7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM60Q495X7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM60Q495X7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.4■■□□□ 1.66
TRIM60Q495X7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.4■■□□□ 1.66
TRIM60Q495X7 MIR3181-201ENST00000578512 73 ntBASIC25.4■■□□□ 1.66
TRIM60Q495X7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRIM60Q495X7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TRIM60Q495X7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TRIM60Q495X7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
TRIM60Q495X7 AC142086.6-201ENST00000621154 1765 ntBASIC25.39■■□□□ 1.65
TRIM60Q495X7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM60Q495X7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
TRIM60Q495X7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
TRIM60Q495X7 AC004911.1-201ENST00000416316 871 ntBASIC25.38■■□□□ 1.65
TRIM60Q495X7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.38■■□□□ 1.65
TRIM60Q495X7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.38■■□□□ 1.65
TRIM60Q495X7 AC009086.3-201ENST00000623486 1008 ntBASIC25.38■■□□□ 1.65
TRIM60Q495X7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.38■■□□□ 1.65
TRIM60Q495X7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM60Q495X7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TRIM60Q495X7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
TRIM60Q495X7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.37■■□□□ 1.65
TRIM60Q495X7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM60Q495X7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM60Q495X7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.37■■□□□ 1.65
TRIM60Q495X7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.37■■□□□ 1.65
TRIM60Q495X7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TRIM60Q495X7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM60Q495X7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TRIM60Q495X7 ID1-201ENST00000376105 1233 ntBASIC25.36■■□□□ 1.65
TRIM60Q495X7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.36■■□□□ 1.65
TRIM60Q495X7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.36■■□□□ 1.65
TRIM60Q495X7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.36■■□□□ 1.65
TRIM60Q495X7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.36■■□□□ 1.65
TRIM60Q495X7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.36■■□□□ 1.65
TRIM60Q495X7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.35■■□□□ 1.65
TRIM60Q495X7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM60Q495X7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.35■■□□□ 1.65
TRIM60Q495X7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.35■■□□□ 1.65
TRIM60Q495X7 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.35■■□□□ 1.65
TRIM60Q495X7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.35■■□□□ 1.65
TRIM60Q495X7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.35■■□□□ 1.65
TRIM60Q495X7 AC126544.1-201ENST00000580842 1059 ntBASIC25.35■■□□□ 1.65
TRIM60Q495X7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.35■■□□□ 1.65
TRIM60Q495X7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.35■■□□□ 1.65
TRIM60Q495X7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.35■■□□□ 1.65
TRIM60Q495X7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TRIM60Q495X7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
TRIM60Q495X7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM60Q495X7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM60Q495X7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.34■■□□□ 1.65
TRIM60Q495X7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.34■■□□□ 1.65
TRIM60Q495X7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.34■■□□□ 1.65
TRIM60Q495X7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TRIM60Q495X7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.34■■□□□ 1.65
TRIM60Q495X7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM60Q495X7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM60Q495X7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM60Q495X7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.33■■□□□ 1.65
TRIM60Q495X7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
TRIM60Q495X7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TRIM60Q495X7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.33■■□□□ 1.65
TRIM60Q495X7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.33■■□□□ 1.64
TRIM60Q495X7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
TRIM60Q495X7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
TRIM60Q495X7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.32■■□□□ 1.64
TRIM60Q495X7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM60Q495X7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM60Q495X7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
TRIM60Q495X7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM60Q495X7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.32■■□□□ 1.64
TRIM60Q495X7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TRIM60Q495X7 TSPY26P-201ENST00000476365 1326 ntBASIC25.32■■□□□ 1.64
TRIM60Q495X7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
TRIM60Q495X7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM60Q495X7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TRIM60Q495X7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms