Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 RAP2CP1-202ENST00000605179 643 ntBASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF260Q3ZCT1 C1orf229-201ENST00000623686 2258 ntBASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 AC007029.1-201ENST00000604183 313 ntBASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 LINC00565-201ENST00000562710 2331 ntBASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF260Q3ZCT1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 AC026202.3-201ENST00000600805 1127 ntBASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF260Q3ZCT1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZNF260Q3ZCT1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZNF260Q3ZCT1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF260Q3ZCT1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF260Q3ZCT1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF260Q3ZCT1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.42■□□□□ 0.7
ZNF260Q3ZCT1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZNF260Q3ZCT1 AC022413.1-201ENST00000624602 984 ntBASIC19.42■□□□□ 0.7
ZNF260Q3ZCT1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZNF260Q3ZCT1 AL161729.1-201ENST00000604104 1402 ntBASIC19.42■□□□□ 0.7
ZNF260Q3ZCT1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
ZNF260Q3ZCT1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZNF260Q3ZCT1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 GPX1-201ENST00000419349 1106 ntBASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.4■□□□□ 0.7
ZNF260Q3ZCT1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.39■□□□□ 0.7
ZNF260Q3ZCT1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF260Q3ZCT1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
ZNF260Q3ZCT1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
ZNF260Q3ZCT1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.39■□□□□ 0.7
ZNF260Q3ZCT1 LINC00526-201ENST00000581067 1875 ntBASIC19.39■□□□□ 0.7
ZNF260Q3ZCT1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF260Q3ZCT1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF260Q3ZCT1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF260Q3ZCT1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF260Q3ZCT1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.39■□□□□ 0.69
ZNF260Q3ZCT1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF260Q3ZCT1 AC090877.2-201ENST00000558441 1738 ntBASIC19.39■□□□□ 0.69
ZNF260Q3ZCT1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZNF260Q3ZCT1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms